| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965474
Identifier: 123965474
GI number: 123965474
Start: 221844
End: 222161
Strand: Reverse
Name: 123965474
Synonym: P9515_02391
Alternate gene names: NA
Gene position: 222161-221844 (Counterclockwise)
Preceding gene: 123965476
Following gene: 123965473
Centisome position: 13.04
GC content: 26.73
Gene sequence:
>318_bases ATGACGAATTCTGATTATCTTTTAAAAGCGGCTATTAAAAAGGTAAGTGAAAAATTAAACGAAATAGTTGTAGAAAAATT TGAAGAAGCTACAAGTATTGCTCAAGAGGCCCCTGAAATCATCAAAAAAGAATTAGATACACTTAAAGGAGCCATAATTG AAGAGGCTGCAAGAATGGAAAATGAAATGGGTCAAAAAAGAAATACTAATAATTCAGAATCTTATAAAGATCCAAACTTA AATGAAGTTTTAAAAGAGATACAAGAAATACAAGAAAAAATTGAAAAATTCAATATGAAAATGAATAATACAATTTAA
Upstream 100 bases:
>100_bases GACAAATGCAAAAGGAAATCAATTGCCTGATTTGTTCTCAATTGATCTATTATCAATTAAGTTATGATTATGAATCACTA ATAGGCTTTAAATATTATTT
Downstream 100 bases:
>100_bases TGAGTAATCATAAATTAAAAAATAGAATACAAAAAATCAAAAGAAGCTTTCTTATTTGGAAAACACTTATTTTACTTTTA GTCAATTTATGGATAGATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MTNSDYLLKAAIKKVSEKLNEIVVEKFEEATSIAQEAPEIIKKELDTLKGAIIEEAARMENEMGQKRNTNNSESYKDPNL NEVLKEIQEIQEKIEKFNMKMNNTI
Sequences:
>Translated_105_residues MTNSDYLLKAAIKKVSEKLNEIVVEKFEEATSIAQEAPEIIKKELDTLKGAIIEEAARMENEMGQKRNTNNSESYKDPNL NEVLKEIQEIQEKIEKFNMKMNNTI >Mature_104_residues TNSDYLLKAAIKKVSEKLNEIVVEKFEEATSIAQEAPEIIKKELDTLKGAIIEEAARMENEMGQKRNTNNSESYKDPNLN EVLKEIQEIQEKIEKFNMKMNNTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12090; Mature: 11959
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNSDYLLKAAIKKVSEKLNEIVVEKFEEATSIAQEAPEIIKKELDTLKGAIIEEAARME CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NEMGQKRNTNNSESYKDPNLNEVLKEIQEIQEKIEKFNMKMNNTI HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TNSDYLLKAAIKKVSEKLNEIVVEKFEEATSIAQEAPEIIKKELDTLKGAIIEEAARME CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NEMGQKRNTNNSESYKDPNLNEVLKEIQEIQEKIEKFNMKMNNTI HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA