| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965345
Identifier: 123965345
GI number: 123965345
Start: 110559
End: 111971
Strand: Reverse
Name: 123965345
Synonym: P9515_01101
Alternate gene names: NA
Gene position: 111971-110559 (Counterclockwise)
Preceding gene: 123965348
Following gene: 123965344
Centisome position: 6.57
GC content: 29.09
Gene sequence:
>1413_bases GTGTGGAAAGAAATTAATTCTAAGGAAAATTCTAATGATTTTTTGATTCCAGAAATTAAATCCCAAATTAATCCAGCAGA AATAGAAAGTGTTGAGAATAATTCTATTGCTGAAGAAATAGGCTTCGAATCAGGTGATTCAATTATTAGTATTAATGGGA AGAAACCAAGAGATTTGATTGATTACCAAATCCTAATTAGTGAAGAAATTTTAGATATATCGGTATTAGATAAATATAAG AAAATCCACAATATTAGTATTGAAAAAGATCAAGACGATAATTTAGGCATTAATTTTAAAGAAGCATTGTTTGATTCAAT AAAACAGTGTAATAATAAGTGTCCGTTTTGCTTTATCGATCAACAACCAAATGGCAAAAGAAAAAGTCTCTATGTAAAAG ATGATGACTATAGATTGAGTTTTTTGTATGGTTCATATCTAACACTTACAAATCTAAACAAAGATGACTGGAACAGAATA TCTACTCAAAAACTATCCCCGCTTTTTATTTCAATACATGCTACCGACCCAAAAACCCGAGAACAATTATTAAAAAATAA AAAAGCAAGTCAAATTCTAAATCAAATTGAATGGTTAGAGGAAAATTCAATTCAAATACATGCTCAAATAGTTGTATGTC CCAAAATTAACGATGGTAAGATCTTAGAAAAATCTATTTATGATCTTGCAAAATTTCATAAAAAAAGTTTTAAAACAGTA CTTTCTACAGCAATAGTTCCAGTAGGTCTTACTAAGTTCAGGCCTGAAAATGATGGCTTATTACCAATAGGAAAAGAATA TGCAAAAGAAATTATTAAACAAGTGGAAAAAATTCAAACCTCTCTTCAACAAAGAATTGGTACTCGCTTTTGTTGGCTTG CAGACGAATGGTACTTAATAGCTGGTCGCAAATTACCAAGTTATACAACATATGAAAATATGCCCCAAGAATCTAATGGA GTAGGCTCAATACGAAGCTTTCTTAAAATATTAGAAACTAAAACAAAATCTCTGCCTGAAAAAATAGATAAACAAAGAAA AGTCAGTTGGATTGTTGGGAAATTAGTTTACGAAGCACTACTTCCAACAGTACGAAAACTTAATAAAATTAATGGACTAA CAATAAATCTATATGGCTTACCAAGTATTTATTGGGGTCAAGATCAAGTTGTGACAGGGCTTTTAACTGGTGAAGATTTA ATTGCTGGACTACAGAATAAGGATTTAGGAGAAAGTATTTTCATACCATCAATCATGCTAAAACTTAATAGTGATTTGTT TTTAGATGACAAAAATATAACTGAAGTTTCAAATAAACTGAAAACTAATATTCACGTTCTTGATGATACAAATGATATTA TTAATAATCTAATTGGTATATCTAATACTTATAAAATACTTGATTATGCTTAG
Upstream 100 bases:
>100_bases AAATAAATTAAACATATTTAGTATTTTAAGAGTATTTAATATACTTTGAGTCTTATATGAGTTTACAATAAGTATAAAGT TAAAAGTTTGGCCTTTAATT
Downstream 100 bases:
>100_bases AAAACTTATACATCCAGTCTTATTTTTTCCACTTTTTTTATTTATTAATTCTCAAAAAGCAGTATTAAGTGGCTCTAACA ATAATATTGAAGCAATCCTA
Product: putative Fe-S oxidoreductase
Products: NA
Alternate protein names: FeS-Containing Oxidoreductase; FeS-Containing Cyanobacterial-Specific Oxidoreductase; FeS-Containing-Specific Oxidoreductase; PDZ Domain Protein; FeS-Containing Organism-Specific Oxidoreductase; Response Regulator Receiver Protein; PDZ Domain-Containing Protein
Number of amino acids: Translated: 470; Mature: 470
Protein sequence:
>470_residues MWKEINSKENSNDFLIPEIKSQINPAEIESVENNSIAEEIGFESGDSIISINGKKPRDLIDYQILISEEILDISVLDKYK KIHNISIEKDQDDNLGINFKEALFDSIKQCNNKCPFCFIDQQPNGKRKSLYVKDDDYRLSFLYGSYLTLTNLNKDDWNRI STQKLSPLFISIHATDPKTREQLLKNKKASQILNQIEWLEENSIQIHAQIVVCPKINDGKILEKSIYDLAKFHKKSFKTV LSTAIVPVGLTKFRPENDGLLPIGKEYAKEIIKQVEKIQTSLQQRIGTRFCWLADEWYLIAGRKLPSYTTYENMPQESNG VGSIRSFLKILETKTKSLPEKIDKQRKVSWIVGKLVYEALLPTVRKLNKINGLTINLYGLPSIYWGQDQVVTGLLTGEDL IAGLQNKDLGESIFIPSIMLKLNSDLFLDDKNITEVSNKLKTNIHVLDDTNDIINNLIGISNTYKILDYA
Sequences:
>Translated_470_residues MWKEINSKENSNDFLIPEIKSQINPAEIESVENNSIAEEIGFESGDSIISINGKKPRDLIDYQILISEEILDISVLDKYK KIHNISIEKDQDDNLGINFKEALFDSIKQCNNKCPFCFIDQQPNGKRKSLYVKDDDYRLSFLYGSYLTLTNLNKDDWNRI STQKLSPLFISIHATDPKTREQLLKNKKASQILNQIEWLEENSIQIHAQIVVCPKINDGKILEKSIYDLAKFHKKSFKTV LSTAIVPVGLTKFRPENDGLLPIGKEYAKEIIKQVEKIQTSLQQRIGTRFCWLADEWYLIAGRKLPSYTTYENMPQESNG VGSIRSFLKILETKTKSLPEKIDKQRKVSWIVGKLVYEALLPTVRKLNKINGLTINLYGLPSIYWGQDQVVTGLLTGEDL IAGLQNKDLGESIFIPSIMLKLNSDLFLDDKNITEVSNKLKTNIHVLDDTNDIINNLIGISNTYKILDYA >Mature_470_residues MWKEINSKENSNDFLIPEIKSQINPAEIESVENNSIAEEIGFESGDSIISINGKKPRDLIDYQILISEEILDISVLDKYK KIHNISIEKDQDDNLGINFKEALFDSIKQCNNKCPFCFIDQQPNGKRKSLYVKDDDYRLSFLYGSYLTLTNLNKDDWNRI STQKLSPLFISIHATDPKTREQLLKNKKASQILNQIEWLEENSIQIHAQIVVCPKINDGKILEKSIYDLAKFHKKSFKTV LSTAIVPVGLTKFRPENDGLLPIGKEYAKEIIKQVEKIQTSLQQRIGTRFCWLADEWYLIAGRKLPSYTTYENMPQESNG VGSIRSFLKILETKTKSLPEKIDKQRKVSWIVGKLVYEALLPTVRKLNKINGLTINLYGLPSIYWGQDQVVTGLLTGEDL IAGLQNKDLGESIFIPSIMLKLNSDLFLDDKNITEVSNKLKTNIHVLDDTNDIINNLIGISNTYKILDYA
Specific function: Unknown
COG id: COG1625
COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53696; Mature: 53696
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWKEINSKENSNDFLIPEIKSQINPAEIESVENNSIAEEIGFESGDSIISINGKKPRDLI CCCCCCCCCCCCCEECHHHHHCCCHHHHHHCCCCCHHHHCCCCCCCCEEEECCCCCCHHH DYQILISEEILDISVLDKYKKIHNISIEKDQDDNLGINFKEALFDSIKQCNNKCPFCFID CEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE QQPNGKRKSLYVKDDDYRLSFLYGSYLTLTNLNKDDWNRISTQKLSPLFISIHATDPKTR CCCCCCCCEEEEECCCEEEEEEECCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCHHH EQLLKNKKASQILNQIEWLEENSIQIHAQIVVCPKINDGKILEKSIYDLAKFHKKSFKTV HHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH LSTAIVPVGLTKFRPENDGLLPIGKEYAKEIIKQVEKIQTSLQQRIGTRFCWLADEWYLI HHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEE AGRKLPSYTTYENMPQESNGVGSIRSFLKILETKTKSLPEKIDKQRKVSWIVGKLVYEAL ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPTVRKLNKINGLTINLYGLPSIYWGQDQVVTGLLTGEDLIAGLQNKDLGESIFIPSIML HHHHHHHHHCCCEEEEEEECCCEEECCCCEEEEEECCHHHHHCCCCCCCCCHHHHHHHHH KLNSDLFLDDKNITEVSNKLKTNIHVLDDTNDIINNLIGISNTYKILDYA HCCCCEEECCCCHHHHHHHHHCCEEEEECCHHHHHHHHCCCCCEEEEECC >Mature Secondary Structure MWKEINSKENSNDFLIPEIKSQINPAEIESVENNSIAEEIGFESGDSIISINGKKPRDLI CCCCCCCCCCCCCEECHHHHHCCCHHHHHHCCCCCHHHHCCCCCCCCEEEECCCCCCHHH DYQILISEEILDISVLDKYKKIHNISIEKDQDDNLGINFKEALFDSIKQCNNKCPFCFID CEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEE QQPNGKRKSLYVKDDDYRLSFLYGSYLTLTNLNKDDWNRISTQKLSPLFISIHATDPKTR CCCCCCCCEEEEECCCEEEEEEECCEEEEECCCHHHHHHHHHCCCCEEEEEEECCCCHHH EQLLKNKKASQILNQIEWLEENSIQIHAQIVVCPKINDGKILEKSIYDLAKFHKKSFKTV HHHHHCCHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH LSTAIVPVGLTKFRPENDGLLPIGKEYAKEIIKQVEKIQTSLQQRIGTRFCWLADEWYLI HHHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCEEEE AGRKLPSYTTYENMPQESNGVGSIRSFLKILETKTKSLPEKIDKQRKVSWIVGKLVYEAL ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LPTVRKLNKINGLTINLYGLPSIYWGQDQVVTGLLTGEDLIAGLQNKDLGESIFIPSIML HHHHHHHHHCCCEEEEEEECCCEEECCCCEEEEEECCHHHHHCCCCCCCCCHHHHHHHHH KLNSDLFLDDKNITEVSNKLKTNIHVLDDTNDIINNLIGISNTYKILDYA HCCCCEEECCCCHHHHHHHHHCCEEEEECCHHHHHHHHCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA