Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123965341

Identifier: 123965341

GI number: 123965341

Start: 106974

End: 107312

Strand: Reverse

Name: 123965341

Synonym: P9515_01061

Alternate gene names: NA

Gene position: 107312-106974 (Counterclockwise)

Preceding gene: 123965342

Following gene: 123965337

Centisome position: 6.3

GC content: 22.12

Gene sequence:

>339_bases
TTGCTTAATAAAATGAATAAACAATTAGTAATTTATTTTCTTATGTTTCTAATAGTTATTCCAGTTTTTGGATTTAATTT
TTTATTTAATTTATTAGGAAATATCTTACTGCTTATATTTTTAGTACCTCTTTTAATATTGTTAACTACATTAATAAGCT
TTAATTCCTTGAAGTCTAAAATTAATATTTGTGATCAATGTGGGAATATATCATTAGGAATAAATAATGATTGCTCAAGA
TGTGGAGCAGATTTAAGTGATATAAATTCAAAAAATTTCGAAAAATTTAAAAAACCAAGTGAAGCTACTATTGAAGTAAA
AGCAGAAGAAATTAACTGA

Upstream 100 bases:

>100_bases
GAGTTATTTTATATTTTGGACAATGCTGGAGCGTTGTTATAGCAAGTATGAGTTTAATAAATAGAAGGAGAAATAAGTAA
ATGAACAATAGTGATATGAT

Downstream 100 bases:

>100_bases
CTGAATTTTGATTTTTCCTTAGTAAAATTTAACCAATCCCAATTTGTCTTAAAATACTTTGACCTGTAATCAATTCTGTT
CCTAAACCTATTAATATACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MLNKMNKQLVIYFLMFLIVIPVFGFNFLFNLLGNILLLIFLVPLLILLTTLISFNSLKSKINICDQCGNISLGINNDCSR
CGADLSDINSKNFEKFKKPSEATIEVKAEEIN

Sequences:

>Translated_112_residues
MLNKMNKQLVIYFLMFLIVIPVFGFNFLFNLLGNILLLIFLVPLLILLTTLISFNSLKSKINICDQCGNISLGINNDCSR
CGADLSDINSKNFEKFKKPSEATIEVKAEEIN
>Mature_112_residues
MLNKMNKQLVIYFLMFLIVIPVFGFNFLFNLLGNILLLIFLVPLLILLTTLISFNSLKSKINICDQCGNISLGINNDCSR
CGADLSDINSKNFEKFKKPSEATIEVKAEEIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12634; Mature: 12634

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKMNKQLVIYFLMFLIVIPVFGFNFLFNLLGNILLLIFLVPLLILLTTLISFNSLKSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INICDQCGNISLGINNDCSRCGADLSDINSKNFEKFKKPSEATIEVKAEEIN
HHHHHHCCCCCCCCCCCHHHHCCCHHHCCCHHHHHHCCCCCCEEEEEECCCC
>Mature Secondary Structure
MLNKMNKQLVIYFLMFLIVIPVFGFNFLFNLLGNILLLIFLVPLLILLTTLISFNSLKSK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
INICDQCGNISLGINNDCSRCGADLSDINSKNFEKFKKPSEATIEVKAEEIN
HHHHHHCCCCCCCCCCCHHHHCCCHHHCCCHHHHHHCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA