| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123965331
Identifier: 123965331
GI number: 123965331
Start: 101573
End: 101884
Strand: Reverse
Name: 123965331
Synonym: P9515_00961
Alternate gene names: NA
Gene position: 101884-101573 (Counterclockwise)
Preceding gene: 123965334
Following gene: 123965326
Centisome position: 5.98
GC content: 34.62
Gene sequence:
>312_bases ATGGCAACCCGCCAAAACTCTACTAACGGGAGGCCAAAATCTCCTAGGATACAAGTGGTTCTTCCAGAATCGATTTGTGA AAAGCTAACTACTTTAGCTGAGAGTGAATCAAGAACTGTAAGTAATATGGCAAAAGTGTTGATTCAGGAAGGTATAAAAA ATTATTTTGAGAAAGAAGCTCAATCTCTGATATCAGATACGAAAATAAATACCGATAACTTTAGAGATACATTAGAAAGA CACAGTATTAAAAGATTAAAAGGAGCTCCCCAAAGGATTAGATATTCAAAAAACCAGACCCAAAATGATTAA
Upstream 100 bases:
>100_bases AATTGATCAAAGGCATATAACCCTACTTAATAATATACACAAAGATACTACCCTTGACTAACTGTGTATACTTAGAAGTA ACAGTTATGCAGTTAGACTC
Downstream 100 bases:
>100_bases TTTTGAGGTAATTTCTGTAAATCTACCGTTTTTCCCATAACCACCAAAATATTTCCTCTCTCAAGAATATATTTGGCAGG AGGATTTACTGTTAATTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MATRQNSTNGRPKSPRIQVVLPESICEKLTTLAESESRTVSNMAKVLIQEGIKNYFEKEAQSLISDTKINTDNFRDTLER HSIKRLKGAPQRIRYSKNQTQND
Sequences:
>Translated_103_residues MATRQNSTNGRPKSPRIQVVLPESICEKLTTLAESESRTVSNMAKVLIQEGIKNYFEKEAQSLISDTKINTDNFRDTLER HSIKRLKGAPQRIRYSKNQTQND >Mature_102_residues ATRQNSTNGRPKSPRIQVVLPESICEKLTTLAESESRTVSNMAKVLIQEGIKNYFEKEAQSLISDTKINTDNFRDTLERH SIKRLKGAPQRIRYSKNQTQND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11793; Mature: 11662
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRQNSTNGRPKSPRIQVVLPESICEKLTTLAESESRTVSNMAKVLIQEGIKNYFEKEA CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSLISDTKINTDNFRDTLERHSIKRLKGAPQRIRYSKNQTQND HHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCC >Mature Secondary Structure ATRQNSTNGRPKSPRIQVVLPESICEKLTTLAESESRTVSNMAKVLIQEGIKNYFEKEA CCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QSLISDTKINTDNFRDTLERHSIKRLKGAPQRIRYSKNQTQND HHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA