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The map label for this gene is sufD [C]

Identifier: 123965315

GI number: 123965315

Start: 85270

End: 86487

Strand: Reverse

Name: sufD [C]

Synonym: P9515_00801

Alternate gene names: 123965315

Gene position: 86487-85270 (Counterclockwise)

Preceding gene: 123965316

Following gene: 123965314

Centisome position: 5.08

GC content: 27.83

Gene sequence:

>1218_bases
ATGCAAATTATTGAAGAGATCAAAAAAAATGAATTATTTAGTAACCCATCTGAGATTCAAAAATTTTGTCTCAACAAATT
AAAATTAAATCCATTACCAAATGTCAAAAGTGAATATTGGAGACTTTCCAATAAATCGAAATTTTCAAGCTTGTTAGATC
ATATTCATAAAAATAAAGAATCTAAAATTAATCTCCCATATACGAATACATCTCAAAACATAATTAGACTAATAATAGGT
GAAGATAGTTCAATCAATTATGAAGAAGAAAACTTTTCAATAAAACAATTACGAGAAACCGAAATAGCTGATTACATCAA
AAAAAACATCTCTAATTTTGATCAAAATAATCATTGGAGTGACCTCCTAAATCATTGTTTAAGTTCTAAAAAAAATATCT
TAGGTTTAAGTATATCTGGGAATAAAATTCCTCCTATTGAAATATTTAGTGCTTCATCACCGGAATCTTTTAACGCTAAA
ACACTTATTTTATTCTTTGATAAAAATTCTAAAATCGATTTATTACAAATTAATCTAGGGAACGAAAATTCTTCATTATC
TCAATCAACTTATTTCTGTTTAGAGGAAAATACTTCGGTAAATCATGGTGTGGTTTCCTATGGAGAAAGCAAATCTAATT
TATTGAATTCTTTAAATGTAATTCAAAAAGCAAAAAGTGAATACAGCCTAGGATCATTACATTTCAAATTTAATTATGCA
AGATTTGAAATCAATATTAATCAATTAGATGGGAATGCTAAAACAAACATAAAAGGAATACAAATAACGAAAAACAACGA
CCAAATAGCAACTTATACAAACATGAATTTTAACGGCCCCAATGGTTTCTTAGATCAAATTAATAAATCCTTAGCAGATG
ATAAATCACATGCTGTCTTTGAAGGGTCAATCATTGTTCCGAAAATTGCCCAAAAAACAGATGCGTCCCAATTAAGCAGA
AATTTACTTTTATCAAGATTCGCAAAAATAGATACTAAACCTCAGTTAGAAATAATCGCTGACGACGTAAAATGCAAACA
TGGTGCAACTATTTCACAATTAAACGAAGAAGAAATTTTCTATATGAGATCAAGAGGACTCACACTCGCAGAAGCCAGTA
AACTACAATTAAGTTCTTACATTCAAGAAATAATCTCAAGTATTCCTATTTCTAAAGATAGATGGGATTTACTTGATAAA
CTTTTAAAAGAAAATTAA

Upstream 100 bases:

>100_bases
GATGGTCAAATAATAAAAACCGGAGGAAGCGATCTGGCCTTAGAACTGGAAAAATATGGTTATGAATGGACTGATAAATT
TATAAAAGAGTGATAGATAA

Downstream 100 bases:

>100_bases
TGGAAACAATTAAAAATTTCCCGCAAATAGTCAAAAAAAACTTTAATTTGGTAGATAAAAAAGATTTTCCTTTATTAGAG
AATAATTTTAAAAGCAAAAA

Product: ABC transporter, membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 405

Protein sequence:

>405_residues
MQIIEEIKKNELFSNPSEIQKFCLNKLKLNPLPNVKSEYWRLSNKSKFSSLLDHIHKNKESKINLPYTNTSQNIIRLIIG
EDSSINYEEENFSIKQLRETEIADYIKKNISNFDQNNHWSDLLNHCLSSKKNILGLSISGNKIPPIEIFSASSPESFNAK
TLILFFDKNSKIDLLQINLGNENSSLSQSTYFCLEENTSVNHGVVSYGESKSNLLNSLNVIQKAKSEYSLGSLHFKFNYA
RFEININQLDGNAKTNIKGIQITKNNDQIATYTNMNFNGPNGFLDQINKSLADDKSHAVFEGSIIVPKIAQKTDASQLSR
NLLLSRFAKIDTKPQLEIIADDVKCKHGATISQLNEEEIFYMRSRGLTLAEASKLQLSSYIQEIISSIPISKDRWDLLDK
LLKEN

Sequences:

>Translated_405_residues
MQIIEEIKKNELFSNPSEIQKFCLNKLKLNPLPNVKSEYWRLSNKSKFSSLLDHIHKNKESKINLPYTNTSQNIIRLIIG
EDSSINYEEENFSIKQLRETEIADYIKKNISNFDQNNHWSDLLNHCLSSKKNILGLSISGNKIPPIEIFSASSPESFNAK
TLILFFDKNSKIDLLQINLGNENSSLSQSTYFCLEENTSVNHGVVSYGESKSNLLNSLNVIQKAKSEYSLGSLHFKFNYA
RFEININQLDGNAKTNIKGIQITKNNDQIATYTNMNFNGPNGFLDQINKSLADDKSHAVFEGSIIVPKIAQKTDASQLSR
NLLLSRFAKIDTKPQLEIIADDVKCKHGATISQLNEEEIFYMRSRGLTLAEASKLQLSSYIQEIISSIPISKDRWDLLDK
LLKEN
>Mature_405_residues
MQIIEEIKKNELFSNPSEIQKFCLNKLKLNPLPNVKSEYWRLSNKSKFSSLLDHIHKNKESKINLPYTNTSQNIIRLIIG
EDSSINYEEENFSIKQLRETEIADYIKKNISNFDQNNHWSDLLNHCLSSKKNILGLSISGNKIPPIEIFSASSPESFNAK
TLILFFDKNSKIDLLQINLGNENSSLSQSTYFCLEENTSVNHGVVSYGESKSNLLNSLNVIQKAKSEYSLGSLHFKFNYA
RFEININQLDGNAKTNIKGIQITKNNDQIATYTNMNFNGPNGFLDQINKSLADDKSHAVFEGSIIVPKIAQKTDASQLSR
NLLLSRFAKIDTKPQLEIIADDVKCKHGATISQLNEEEIFYMRSRGLTLAEASKLQLSSYIQEIISSIPISKDRWDLLDK
LLKEN

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=144, Percent_Identity=39.5833333333333, Blast_Score=107, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 46009; Mature: 46009

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIIEEIKKNELFSNPSEIQKFCLNKLKLNPLPNVKSEYWRLSNKSKFSSLLDHIHKNKE
CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCC
SKINLPYTNTSQNIIRLIIGEDSSINYEEENFSIKQLRETEIADYIKKNISNFDQNNHWS
CEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
DLLNHCLSSKKNILGLSISGNKIPPIEIFSASSPESFNAKTLILFFDKNSKIDLLQINLG
HHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEC
NENSSLSQSTYFCLEENTSVNHGVVSYGESKSNLLNSLNVIQKAKSEYSLGSLHFKFNYA
CCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEE
RFEININQLDGNAKTNIKGIQITKNNDQIATYTNMNFNGPNGFLDQINKSLADDKSHAVF
EEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEE
EGSIIVPKIAQKTDASQLSRNLLLSRFAKIDTKPQLEIIADDVKCKHGATISQLNEEEIF
ECCEEECCHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCHHEE
YMRSRGLTLAEASKLQLSSYIQEIISSIPISKDRWDLLDKLLKEN
EECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQIIEEIKKNELFSNPSEIQKFCLNKLKLNPLPNVKSEYWRLSNKSKFSSLLDHIHKNKE
CCHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCC
SKINLPYTNTSQNIIRLIIGEDSSINYEEENFSIKQLRETEIADYIKKNISNFDQNNHWS
CEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHH
DLLNHCLSSKKNILGLSISGNKIPPIEIFSASSPESFNAKTLILFFDKNSKIDLLQINLG
HHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCEEEEEEEEC
NENSSLSQSTYFCLEENTSVNHGVVSYGESKSNLLNSLNVIQKAKSEYSLGSLHFKFNYA
CCCCCCCCCEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEEEE
RFEININQLDGNAKTNIKGIQITKNNDQIATYTNMNFNGPNGFLDQINKSLADDKSHAVF
EEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCEEE
EGSIIVPKIAQKTDASQLSRNLLLSRFAKIDTKPQLEIIADDVKCKHGATISQLNEEEIF
ECCEEECCHHCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHCCCHHEE
YMRSRGLTLAEASKLQLSSYIQEIISSIPISKDRWDLLDKLLKEN
EECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]