| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is hit [C]
Identifier: 123965311
GI number: 123965311
Start: 81019
End: 81360
Strand: Reverse
Name: hit [C]
Synonym: P9515_00761
Alternate gene names: 123965311
Gene position: 81360-81019 (Counterclockwise)
Preceding gene: 123965312
Following gene: 123965310
Centisome position: 4.77
GC content: 34.21
Gene sequence:
>342_bases ATGACTCAAACCACAATCTTCAGCAAAATAATCAATGGTGAAATTCCCTGTGAAAAGCTTTATGAAGACGAGCTTTGTAT AGCATTTGATGACATTGCCGCTCAAGCTCCAGTTCATTTTTTAGTAATTCCTAAAAAACCGCTAGTTAGTTTATATGAAT GTTTAGAAGAGGATAAAGATTTATTAGGTCATCTTCTTTTGGTAGGAAAAAATATTGCTAGATCGAAGAAATTAAAGAAT TGGAGAACAGTGATTAATACTGGGGAAGAATCCGGACAAACAGTATTTCATTTACATATACATTTTTTAGCCGGCAGAAA AATGAGTTGGCCGCCAGGATAA
Upstream 100 bases:
>100_bases AGTTACATCCAAAGAAGATTTAAAAACTGAACTAAAAAAAGAAGGATTCCAAATGAAAGATGTGTTTCCAATAAGTCAAT CTTAATAATCAAAATTATTA
Downstream 100 bases:
>100_bases AACTCTCAAAAAAGTTAATTTTTAGCTATAAGTAAGAATAAAAGAATATGAAGACTCCTGAATCTTTAAATAGTAAGCCT AATAATTTCTTAAATCTAAT
Product: HIT (histidine triad) family protein
Products: NA
Alternate protein names: ORF 1 [H]
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MTQTTIFSKIINGEIPCEKLYEDELCIAFDDIAAQAPVHFLVIPKKPLVSLYECLEEDKDLLGHLLLVGKNIARSKKLKN WRTVINTGEESGQTVFHLHIHFLAGRKMSWPPG
Sequences:
>Translated_113_residues MTQTTIFSKIINGEIPCEKLYEDELCIAFDDIAAQAPVHFLVIPKKPLVSLYECLEEDKDLLGHLLLVGKNIARSKKLKN WRTVINTGEESGQTVFHLHIHFLAGRKMSWPPG >Mature_112_residues TQTTIFSKIINGEIPCEKLYEDELCIAFDDIAAQAPVHFLVIPKKPLVSLYECLEEDKDLLGHLLLVGKNIARSKKLKNW RTVINTGEESGQTVFHLHIHFLAGRKMSWPPG
Specific function: Unknown
COG id: COG0537
COG function: function code FGR; Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HIT domain [H]
Homologues:
Organism=Homo sapiens, GI14211923, Length=110, Percent_Identity=54.5454545454545, Blast_Score=135, Evalue=9e-33, Organism=Homo sapiens, GI4885413, Length=110, Percent_Identity=51.8181818181818, Blast_Score=125, Evalue=6e-30, Organism=Escherichia coli, GI1787346, Length=111, Percent_Identity=38.7387387387387, Blast_Score=84, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17506713, Length=113, Percent_Identity=42.4778761061947, Blast_Score=115, Evalue=5e-27, Organism=Saccharomyces cerevisiae, GI6320078, Length=112, Percent_Identity=33.9285714285714, Blast_Score=60, Evalue=9e-11, Organism=Drosophila melanogaster, GI28574010, Length=113, Percent_Identity=53.0973451327434, Blast_Score=139, Evalue=4e-34, Organism=Drosophila melanogaster, GI24581222, Length=113, Percent_Identity=53.0973451327434, Blast_Score=138, Evalue=5e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011146 - InterPro: IPR011151 - InterPro: IPR019808 - InterPro: IPR001310 [H]
Pfam domain/function: PF01230 HIT [H]
EC number: NA
Molecular weight: Translated: 12800; Mature: 12669
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00892 HIT_1 ; PS51084 HIT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTTIFSKIINGEIPCEKLYEDELCIAFDDIAAQAPVHFLVIPKKPLVSLYECLEEDKD CCCHHHHHHHHCCCCCHHHHCCCCEEEEECCHHCCCCEEEEEECCCHHHHHHHHHHHHHH LLGHLLLVGKNIARSKKLKNWRTVINTGEESGQTVFHLHIHFLAGRKMSWPPG HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCC >Mature Secondary Structure TQTTIFSKIINGEIPCEKLYEDELCIAFDDIAAQAPVHFLVIPKKPLVSLYECLEEDKD CCHHHHHHHHCCCCCHHHHCCCCEEEEECCHHCCCCEEEEEECCCHHHHHHHHHHHHHH LLGHLLLVGKNIARSKKLKNWRTVINTGEESGQTVFHLHIHFLAGRKMSWPPG HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2108129; 1472710 [H]