| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is murC [H]
Identifier: 123965256
GI number: 123965256
Start: 22542
End: 23951
Strand: Reverse
Name: murC [H]
Synonym: P9515_00211
Alternate gene names: 123965256
Gene position: 23951-22542 (Counterclockwise)
Preceding gene: 123965258
Following gene: 123965255
Centisome position: 1.41
GC content: 25.74
Gene sequence:
>1410_bases TTGAATACAAATTTAATTGTCAGAGGTCATTTTCATTTTATTGGCATTGGTGGTATTGGAATGTCTGCGATCGCTTTGGC ATTAATAAAAAAGGGATACTCAGTTTCTGGTTCTGATTTAGTCAAAAATGAAGAAACGAATAAATTAAAAGAATTTGGAG CAATAATTTTTGATTCTCAAATAAGTACTAATATTCAATTTGTGCTTTCACAATTTCAAAATCAAACAATTAATTTTGTT ATTAGCTCAGCAATCAAAGATGATAATGAAGAATTATGCTTTTGCAAAAAAAATAATTTATTAATCAAACATCGTTCTGA AATTCTTGCGATGATAATGAAATCATACATTACATTATCCATAGCAGGAAGTCATGGAAAAACTTCAACTAGTACTTTCC TTTCTACTTTATTAGAGTTATGTACTCATGATTCTTCTTCAATAACTGGTGGGATAATCCCAATTTATAAATCCAATGCT CATATCGAAAATACAAAATACCTAGTAACAGAAATAGATGAATCTGACGGAACAATTAATAATTACACTTCCAACATTGG AATAATTAATAATATTGATTTCGATCATTGTGACCATTATTCTAATATCGATGAAATACTATCCTCATTTAAACAATTTG CCTCTAATTCCAAAAAATTATTAATTAATTACGATTGTAAAATTACTAGAGAAAATTTTACTTCACATAATCAATGGTCT ATTAAAGAAAAAAATAATATTACTTATTCAATAATTCCAAATACCATAAATAAAGATATAACCATTGGAAAATATTATGA ACATGGCGATTTCGTTGACAGTATAAATATCCCAATTCCAGGGTTACATAATCTTTCAAATATTACTGCTGCAATAGCAG CCTGTAGAATGATTGGAGTAAGTTTTAAAGAGATAAAAAAAAATATCAAATCTCTAGAATTACCAAAAAAAAGGTTTGAA TTTAGAGGTGAACTGAATCAAAGAGTTTTTTATGATGATTATGCACATCATCCAAACGAAATTAAAGCCACGATTGATTT GGCAAGGTTATTTATTATAGATAATAATATAAATAAAAATCAAAAAGGAAGATTAATTGCTATTTTTCAACCACATAGAT TTACTAGAGTAAAACAATTTATTCATGAGTTTGTCCAAGAATTATCAAAAGCCGATGTTATCTACTTAACAAATATTTTT GGTGCTGGAGAAGAAAATATAGATAACATTAATTCGCAAGTAATTGCAAACCTTATTTATAAAAAAAATAAAAATGTTAC ATGTTTAAAAAACAATTATGAAATAAAAGATAAATTTTTTAAATTAACGAAAGAAAATGATTTTATATTAAATATGGGTG CTGGAGATTGTCATAAACTATGGTCAATATTAAATAATAAAAATACTTAA
Upstream 100 bases:
>100_bases TTTTTGTATTAATTCATAAAAAAACAAACATTTTTTGTAAAAATTAAATGTCAAAATAATTACTTAGAAGTTATCTTGAT TTTAAGTATAAAGTTCATAA
Downstream 100 bases:
>100_bases AAGATTAAAAAAATAATGGAAAATATTAATTTAGAAGAGAAAATAAACCTTTCAAATTATACAACTATAAAAGTTGGTGG ATTTGCAGAATATTTTTCAC
Product: UDP-N-acetylmuramate-alanine ligase
Products: NA
Alternate protein names: UDP-N-acetylmuramoyl-L-alanine synthetase [H]
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MNTNLIVRGHFHFIGIGGIGMSAIALALIKKGYSVSGSDLVKNEETNKLKEFGAIIFDSQISTNIQFVLSQFQNQTINFV ISSAIKDDNEELCFCKKNNLLIKHRSEILAMIMKSYITLSIAGSHGKTSTSTFLSTLLELCTHDSSSITGGIIPIYKSNA HIENTKYLVTEIDESDGTINNYTSNIGIINNIDFDHCDHYSNIDEILSSFKQFASNSKKLLINYDCKITRENFTSHNQWS IKEKNNITYSIIPNTINKDITIGKYYEHGDFVDSINIPIPGLHNLSNITAAIAACRMIGVSFKEIKKNIKSLELPKKRFE FRGELNQRVFYDDYAHHPNEIKATIDLARLFIIDNNINKNQKGRLIAIFQPHRFTRVKQFIHEFVQELSKADVIYLTNIF GAGEENIDNINSQVIANLIYKKNKNVTCLKNNYEIKDKFFKLTKENDFILNMGAGDCHKLWSILNNKNT
Sequences:
>Translated_469_residues MNTNLIVRGHFHFIGIGGIGMSAIALALIKKGYSVSGSDLVKNEETNKLKEFGAIIFDSQISTNIQFVLSQFQNQTINFV ISSAIKDDNEELCFCKKNNLLIKHRSEILAMIMKSYITLSIAGSHGKTSTSTFLSTLLELCTHDSSSITGGIIPIYKSNA HIENTKYLVTEIDESDGTINNYTSNIGIINNIDFDHCDHYSNIDEILSSFKQFASNSKKLLINYDCKITRENFTSHNQWS IKEKNNITYSIIPNTINKDITIGKYYEHGDFVDSINIPIPGLHNLSNITAAIAACRMIGVSFKEIKKNIKSLELPKKRFE FRGELNQRVFYDDYAHHPNEIKATIDLARLFIIDNNINKNQKGRLIAIFQPHRFTRVKQFIHEFVQELSKADVIYLTNIF GAGEENIDNINSQVIANLIYKKNKNVTCLKNNYEIKDKFFKLTKENDFILNMGAGDCHKLWSILNNKNT >Mature_469_residues MNTNLIVRGHFHFIGIGGIGMSAIALALIKKGYSVSGSDLVKNEETNKLKEFGAIIFDSQISTNIQFVLSQFQNQTINFV ISSAIKDDNEELCFCKKNNLLIKHRSEILAMIMKSYITLSIAGSHGKTSTSTFLSTLLELCTHDSSSITGGIIPIYKSNA HIENTKYLVTEIDESDGTINNYTSNIGIINNIDFDHCDHYSNIDEILSSFKQFASNSKKLLINYDCKITRENFTSHNQWS IKEKNNITYSIIPNTINKDITIGKYYEHGDFVDSINIPIPGLHNLSNITAAIAACRMIGVSFKEIKKNIKSLELPKKRFE FRGELNQRVFYDDYAHHPNEIKATIDLARLFIIDNNINKNQKGRLIAIFQPHRFTRVKQFIHEFVQELSKADVIYLTNIF GAGEENIDNINSQVIANLIYKKNKNVTCLKNNYEIKDKFFKLTKENDFILNMGAGDCHKLWSILNNKNT
Specific function: Cell wall formation [H]
COG id: COG0773
COG function: function code M; UDP-N-acetylmuramate-alanine ligase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786279, Length=480, Percent_Identity=28.3333333333333, Blast_Score=167, Evalue=9e-43, Organism=Escherichia coli, GI1790680, Length=397, Percent_Identity=24.9370277078086, Blast_Score=130, Evalue=3e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR016040 - InterPro: IPR005758 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.8 [H]
Molecular weight: Translated: 53279; Mature: 53279
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTNLIVRGHFHFIGIGGIGMSAIALALIKKGYSVSGSDLVKNEETNKLKEFGAIIFDSQ CCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHCCEEECCC ISTNIQFVLSQFQNQTINFVISSAIKDDNEELCFCKKNNLLIKHRSEILAMIMKSYITLS CCCHHHHHHHHHCCCCEEEEEEHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHEEEE IAGSHGKTSTSTFLSTLLELCTHDSSSITGGIIPIYKSNAHIENTKYLVTEIDESDGTIN EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCC NYTSNIGIINNIDFDHCDHYSNIDEILSSFKQFASNSKKLLINYDCKITRENFTSHNQWS CCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECEEEEECCCCCCCCEE IKEKNNITYSIIPNTINKDITIGKYYEHGDFVDSINIPIPGLHNLSNITAAIAACRMIGV EEECCCEEEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCC SFKEIKKNIKSLELPKKRFEFRGELNQRVFYDDYAHHPNEIKATIDLARLFIIDNNINKN CHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECHHCCCCCHHHHHEEEEEEEEEECCCCCC QKGRLIAIFQPHRFTRVKQFIHEFVQELSKADVIYLTNIFGAGEENIDNINSQVIANLIY CCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH KKNKNVTCLKNNYEIKDKFFKLTKENDFILNMGAGDCHKLWSILNNKNT HCCCCEEEEECCCCHHHHHEEEECCCCEEEECCCCCHHHHHHHHCCCCC >Mature Secondary Structure MNTNLIVRGHFHFIGIGGIGMSAIALALIKKGYSVSGSDLVKNEETNKLKEFGAIIFDSQ CCCCEEEEEEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHCCEEECCC ISTNIQFVLSQFQNQTINFVISSAIKDDNEELCFCKKNNLLIKHRSEILAMIMKSYITLS CCCHHHHHHHHHCCCCEEEEEEHHHCCCCCCEEEEECCCEEEEHHHHHHHHHHHHHEEEE IAGSHGKTSTSTFLSTLLELCTHDSSSITGGIIPIYKSNAHIENTKYLVTEIDESDGTIN EECCCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCC NYTSNIGIINNIDFDHCDHYSNIDEILSSFKQFASNSKKLLINYDCKITRENFTSHNQWS CCCCCCCEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECEEEEECCCCCCCCEE IKEKNNITYSIIPNTINKDITIGKYYEHGDFVDSINIPIPGLHNLSNITAAIAACRMIGV EEECCCEEEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCC SFKEIKKNIKSLELPKKRFEFRGELNQRVFYDDYAHHPNEIKATIDLARLFIIDNNINKN CHHHHHHHHHHCCCCHHHHHHHCCCCCEEEECHHCCCCCHHHHHEEEEEEEEEECCCCCC QKGRLIAIFQPHRFTRVKQFIHEFVQELSKADVIYLTNIFGAGEENIDNINSQVIANLIY CCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHH KKNKNVTCLKNNYEIKDKFFKLTKENDFILNMGAGDCHKLWSILNNKNT HCCCCEEEEECCCCHHHHHEEEECCCCEEEECCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12917642 [H]