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The map label for this gene is ydjX [C]

Identifier: 123969423

GI number: 123969423

Start: 1625453

End: 1626055

Strand: Reverse

Name: ydjX [C]

Synonym: A9601_18911

Alternate gene names: 123969423

Gene position: 1626055-1625453 (Counterclockwise)

Preceding gene: 123969424

Following gene: 123969419

Centisome position: 97.38

GC content: 26.7

Gene sequence:

>603_bases
TTGAGAATGAATATACTTCTTGAAAATATTTATAATTTGTCTTTTTTTTTTAATACTGGTTTTGGGATTTTTTCGTTTGT
TTGTATTTATATTTTAATTGTTTTATTAATACTTCCAGCCTCTTGGTTATCTCTATTATCAGGTTTTTTATATGGCTCAT
ATTTAGGATCAATTATCGTTTTCATTTCCGCTTCAATAGGAGCATCAGTTGCTTTTTTTGTATCAAAAAGTTTTTTTGCA
AAAAAGCTAAAAAATCTTTTTAGCCGTTATCCAAGATTAAGTGTCATGGAAAAAGTAGTAGAAAAAGGCGGACTTAAATT
AATTTTTTTAGCGAGATTATCGCCCATATTTCCATTCAGTATTCTTAATTATTTTTATGGTTTGAATAATGTTAAATTTA
GAGATTTCGCTCTTGGTCTTCTTGGAATAATTCCAGGAACTTTTCTTTATTGCTCAATAGGTAGTTTGGCAAAAAGTATT
CAGGAGTTAAAAAATGTGCAATCACCAAATAATTTATATATTACAAGCATTGGAATTATTTCAACTTTTTTAGTTGTATA
TTTCTCAGCTAAATACTCCAGAGAATATTTTGAAAAATCTTAA

Upstream 100 bases:

>100_bases
TTGATAAGGCTCCAAAAGATATTGTTGACGAATGCAGATTTAAATTAAATGAGGGTTCGGTACAGAAGGAAAGAATTACT
AAAAAACTCGAACTTTTGAA

Downstream 100 bases:

>100_bases
GAATTTACTCTTTAATATTCCAATCTCTAATTGATGCAATTAAGATAAACCACAAAAGCCTTAATTTACCTAGTAAAGTT
TTGTTGGCTTCTAATTCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MRMNILLENIYNLSFFFNTGFGIFSFVCIYILIVLLILPASWLSLLSGFLYGSYLGSIIVFISASIGASVAFFVSKSFFA
KKLKNLFSRYPRLSVMEKVVEKGGLKLIFLARLSPIFPFSILNYFYGLNNVKFRDFALGLLGIIPGTFLYCSIGSLAKSI
QELKNVQSPNNLYITSIGIISTFLVVYFSAKYSREYFEKS

Sequences:

>Translated_200_residues
MRMNILLENIYNLSFFFNTGFGIFSFVCIYILIVLLILPASWLSLLSGFLYGSYLGSIIVFISASIGASVAFFVSKSFFA
KKLKNLFSRYPRLSVMEKVVEKGGLKLIFLARLSPIFPFSILNYFYGLNNVKFRDFALGLLGIIPGTFLYCSIGSLAKSI
QELKNVQSPNNLYITSIGIISTFLVVYFSAKYSREYFEKS
>Mature_200_residues
MRMNILLENIYNLSFFFNTGFGIFSFVCIYILIVLLILPASWLSLLSGFLYGSYLGSIIVFISASIGASVAFFVSKSFFA
KKLKNLFSRYPRLSVMEKVVEKGGLKLIFLARLSPIFPFSILNYFYGLNNVKFRDFALGLLGIIPGTFLYCSIGSLAKSI
QELKNVQSPNNLYITSIGIISTFLVVYFSAKYSREYFEKS

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=136, Percent_Identity=29.4117647058824, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22587; Mature: 22587

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMNILLENIYNLSFFFNTGFGIFSFVCIYILIVLLILPASWLSLLSGFLYGSYLGSIIV
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FISASIGASVAFFVSKSFFAKKLKNLFSRYPRLSVMEKVVEKGGLKLIFLARLSPIFPFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHCCCCCHHH
ILNYFYGLNNVKFRDFALGLLGIIPGTFLYCSIGSLAKSIQELKNVQSPNNLYITSIGII
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHH
STFLVVYFSAKYSREYFEKS
HHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRMNILLENIYNLSFFFNTGFGIFSFVCIYILIVLLILPASWLSLLSGFLYGSYLGSIIV
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FISASIGASVAFFVSKSFFAKKLKNLFSRYPRLSVMEKVVEKGGLKLIFLARLSPIFPFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEEHHHHCCCCCHHH
ILNYFYGLNNVKFRDFALGLLGIIPGTFLYCSIGSLAKSIQELKNVQSPNNLYITSIGII
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHH
STFLVVYFSAKYSREYFEKS
HHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]