| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969419
Identifier: 123969419
GI number: 123969419
Start: 1622810
End: 1623337
Strand: Reverse
Name: 123969419
Synonym: A9601_18871
Alternate gene names: NA
Gene position: 1623337-1622810 (Counterclockwise)
Preceding gene: 123969423
Following gene: 123969418
Centisome position: 97.21
GC content: 26.89
Gene sequence:
>528_bases ATGCCTGTAATTCCTCTTTTACCATTATTTCATAGATTTAATAGCCAATATTTTGAAAATTCTTTAACGGTTAATAATCA ACCTTTAGTAAAAGTTAGATGGAGTGATAATAGATTAAAAACTACTGCTGGTTTTTATAAAAGAAAACGTATTAATGGTT TTATAGATTCTGAAATTATCTTATCGAAACCTATCTTGAGTAAATTATCCAATAGTGAAATAAACAGTACTTTATGTCAT GAAATGATACATGCATGGGTAGATAGGATATTAAAGAAAAATGAGATACACGGTCCAAATTTCCTAGAAAAGATGCATGA AATTAATTCAAAAGAGAAGAATTTTCAAATTGCTGTAAGGCACTCATTTCCTATAGAAAGGAGAGAATTAAAATACACAG GAACTTGTCAACATTGTGGTGAGAAATTTTTTTATAGAAAAAGAATAAAGAATATAGCCTGTAAAAAATGTTGTGTAAAT TTCTTTAATGGATCATGGAATAAAAAGTGTTTAATTTTGTTTGATTAG
Upstream 100 bases:
>100_bases CTAATGTTGCATCCATGTTAATTTTACTTTTTTATTACTTTAAGAAAAGAAATCGTTTTTGATGGCTTTTTTGTCAAAAT AATACTAATTTTAATCCATA
Downstream 100 bases:
>100_bases AAATAATTTAGATGTGTTTTTGTTTCTATCTTTGGAATTATTTATTTTTTTAATGTAATTTATATCTTAAAAAGAACAAT AATTTATGGATTCAAGGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MPVIPLLPLFHRFNSQYFENSLTVNNQPLVKVRWSDNRLKTTAGFYKRKRINGFIDSEIILSKPILSKLSNSEINSTLCH EMIHAWVDRILKKNEIHGPNFLEKMHEINSKEKNFQIAVRHSFPIERRELKYTGTCQHCGEKFFYRKRIKNIACKKCCVN FFNGSWNKKCLILFD
Sequences:
>Translated_175_residues MPVIPLLPLFHRFNSQYFENSLTVNNQPLVKVRWSDNRLKTTAGFYKRKRINGFIDSEIILSKPILSKLSNSEINSTLCH EMIHAWVDRILKKNEIHGPNFLEKMHEINSKEKNFQIAVRHSFPIERRELKYTGTCQHCGEKFFYRKRIKNIACKKCCVN FFNGSWNKKCLILFD >Mature_174_residues PVIPLLPLFHRFNSQYFENSLTVNNQPLVKVRWSDNRLKTTAGFYKRKRINGFIDSEIILSKPILSKLSNSEINSTLCHE MIHAWVDRILKKNEIHGPNFLEKMHEINSKEKNFQIAVRHSFPIERRELKYTGTCQHCGEKFFYRKRIKNIACKKCCVNF FNGSWNKKCLILFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI58331107, Length=157, Percent_Identity=35.6687898089172, Blast_Score=67, Evalue=9e-12, Organism=Homo sapiens, GI58331105, Length=157, Percent_Identity=35.6687898089172, Blast_Score=67, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20750; Mature: 20619
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVIPLLPLFHRFNSQYFENSLTVNNQPLVKVRWSDNRLKTTAGFYKRKRINGFIDSEII CCCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCEEHHHHHHHHHHHCCCCCCHHH LSKPILSKLSNSEINSTLCHEMIHAWVDRILKKNEIHGPNFLEKMHEINSKEKNFQIAVR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEE HSFPIERRELKYTGTCQHCGEKFFYRKRIKNIACKKCCVNFFNGSWNKKCLILFD ECCCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure PVIPLLPLFHRFNSQYFENSLTVNNQPLVKVRWSDNRLKTTAGFYKRKRINGFIDSEII CCCHHHHHHHHHHHHHHHCCCEECCCCEEEEEECCCCEEHHHHHHHHHHHCCCCCCHHH LSKPILSKLSNSEINSTLCHEMIHAWVDRILKKNEIHGPNFLEKMHEINSKEKNFQIAVR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCEEEEEE HSFPIERRELKYTGTCQHCGEKFFYRKRIKNIACKKCCVNFFNGSWNKKCLILFD ECCCCCHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA