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The map label for this gene is ydaM [H]

Identifier: 123969400

GI number: 123969400

Start: 1603446

End: 1604747

Strand: Reverse

Name: ydaM [H]

Synonym: A9601_18681

Alternate gene names: 123969400

Gene position: 1604747-1603446 (Counterclockwise)

Preceding gene: 123969401

Following gene: 123969395

Centisome position: 96.1

GC content: 30.95

Gene sequence:

>1302_bases
ATGAGTAAGGGTTTTTATAAAAATCGAAGATTGAAGTCGTTTATATTTCTTAGTGCTTGTTTTTTAGTAGCTTTTATTCC
TCACGCTAACAATATCGAAAATTTCTTTTATATAATGTTGACTCTTTCTTTTGTGATTGTTTTTTACGGTTTAATAGTTA
TTTCGAGAAATTTCAAAAGGAACAACGTTTTAAATACTTTAAGCAGAAGAATTAGCAATAAAGAGTTACCTGTGCTTGAT
ATTTTAGTCGCAGCTAGAGATGAAGAGAATGTCATATCAAGATTAGTTGAAAGATTATTTAGTTTAGATTATCCAACAAA
TAAATTAAATATTCATATAATCGATGATGGTAGTTCTGATAAGACGCCTTTAATTTTAGATCGATTATCAAGACAATATG
AAAAGCTAAAAGTCATAAGTCGTTCTCCAAATGCAGGAGGAGGAAAGTCAGGAGCTTTGAATTATGCCTTGAAATTTACC
CATGGTGAATGGTTACTAGTTTTGGATGCTGATGCTGAATTAAAAAAAGATTCTTTGATAAGGTTATTTAGTTTTGTAGA
AGAGGGTGATTGGTCTGCAGTTCAACTAAGAAAATCAGTAACAAATGTAAGTAAGAATTTTTTAACTTCCTGTCAGTCAA
TGGAGATGGCTATGGATGCAATCTTTCAATATGGAAGATTATCAGTTGCTGGAGTTTCCGAATTAAGGGGAAATGGTCAA
TTAATTAAGAAAGAAACATTATTAGCATGTGGTTCTTTTAATGAAGATACAGTTACAGATGATCTTGATTTGAGTTTAAG
ATTATTATTATCAAAATCTAGAATTGGAATCTTATGGGATCCTCCAGTCATGGAGGAGGCAGTTGAGAATTTAAATGCTT
TATTAGCCCAAAGGCAAAGATGGGCAGAGGGGGGGTTGCAAAGATTCTTCGATTATGGAGATCAATTATTTACTAATAAA
ATTGATTATTTGCAGAAATTTGATTTAACTTACTTTTTCATCTTGCAATATGCATTACCAACCATTTCTATTTTTGATTT
AGTTTTCAGTATTGCTTTTTTAGATTCACCAATTTACTGGCCTATTTCATTTACAGCTTTTATGTTATCTGGAATTGCTT
TTTGGTACGGTTCTTCTTGTAAAAGTGAAGTACCTGTATTGCAAAAAAGCAATTTTTTGATGGTATTTGTATCGGTTTTT
TATTTATCACATTGGTTTTTAGTAATCCCTTGGGTAACTATAAAGATGTCTATTTTTCCTAAAAAGATACTCTGGCGAAA
GACTCTTCATACTGGAGTTTAA

Upstream 100 bases:

>100_bases
CTCTTATGAACAAATATTGAATCATTACTATCGAAATGCAAAACTAAAAAAATTTGAGATATTGTCTCAATGGAAGTTAA
GTAATTAACAATTTACTTTT

Downstream 100 bases:

>100_bases
TCTATTCATCAAGGTCTATAATTTCTCCATTAAAAAAATTTGCTAAATTTTTTGAACTATCATCATAAGTTTCCTCGTTG
GAAATTTTTGTTGTCGAATT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MSKGFYKNRRLKSFIFLSACFLVAFIPHANNIENFFYIMLTLSFVIVFYGLIVISRNFKRNNVLNTLSRRISNKELPVLD
ILVAARDEENVISRLVERLFSLDYPTNKLNIHIIDDGSSDKTPLILDRLSRQYEKLKVISRSPNAGGGKSGALNYALKFT
HGEWLLVLDADAELKKDSLIRLFSFVEEGDWSAVQLRKSVTNVSKNFLTSCQSMEMAMDAIFQYGRLSVAGVSELRGNGQ
LIKKETLLACGSFNEDTVTDDLDLSLRLLLSKSRIGILWDPPVMEEAVENLNALLAQRQRWAEGGLQRFFDYGDQLFTNK
IDYLQKFDLTYFFILQYALPTISIFDLVFSIAFLDSPIYWPISFTAFMLSGIAFWYGSSCKSEVPVLQKSNFLMVFVSVF
YLSHWFLVIPWVTIKMSIFPKKILWRKTLHTGV

Sequences:

>Translated_433_residues
MSKGFYKNRRLKSFIFLSACFLVAFIPHANNIENFFYIMLTLSFVIVFYGLIVISRNFKRNNVLNTLSRRISNKELPVLD
ILVAARDEENVISRLVERLFSLDYPTNKLNIHIIDDGSSDKTPLILDRLSRQYEKLKVISRSPNAGGGKSGALNYALKFT
HGEWLLVLDADAELKKDSLIRLFSFVEEGDWSAVQLRKSVTNVSKNFLTSCQSMEMAMDAIFQYGRLSVAGVSELRGNGQ
LIKKETLLACGSFNEDTVTDDLDLSLRLLLSKSRIGILWDPPVMEEAVENLNALLAQRQRWAEGGLQRFFDYGDQLFTNK
IDYLQKFDLTYFFILQYALPTISIFDLVFSIAFLDSPIYWPISFTAFMLSGIAFWYGSSCKSEVPVLQKSNFLMVFVSVF
YLSHWFLVIPWVTIKMSIFPKKILWRKTLHTGV
>Mature_432_residues
SKGFYKNRRLKSFIFLSACFLVAFIPHANNIENFFYIMLTLSFVIVFYGLIVISRNFKRNNVLNTLSRRISNKELPVLDI
LVAARDEENVISRLVERLFSLDYPTNKLNIHIIDDGSSDKTPLILDRLSRQYEKLKVISRSPNAGGGKSGALNYALKFTH
GEWLLVLDADAELKKDSLIRLFSFVEEGDWSAVQLRKSVTNVSKNFLTSCQSMEMAMDAIFQYGRLSVAGVSELRGNGQL
IKKETLLACGSFNEDTVTDDLDLSLRLLLSKSRIGILWDPPVMEEAVENLNALLAQRQRWAEGGLQRFFDYGDQLFTNKI
DYLQKFDLTYFFILQYALPTISIFDLVFSIAFLDSPIYWPISFTAFMLSGIAFWYGSSCKSEVPVLQKSNFLMVFVSVFY
LSHWFLVIPWVTIKMSIFPKKILWRKTLHTGV

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787259, Length=285, Percent_Identity=25.2631578947368, Blast_Score=79, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 49648; Mature: 49517

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGFYKNRRLKSFIFLSACFLVAFIPHANNIENFFYIMLTLSFVIVFYGLIVISRNFKR
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
NNVLNTLSRRISNKELPVLDILVAARDEENVISRLVERLFSLDYPTNKLNIHIIDDGSSD
HHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCC
KTPLILDRLSRQYEKLKVISRSPNAGGGKSGALNYALKFTHGEWLLVLDADAELKKDSLI
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCHHHHH
RLFSFVEEGDWSAVQLRKSVTNVSKNFLTSCQSMEMAMDAIFQYGRLSVAGVSELRGNGQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHCCCCC
LIKKETLLACGSFNEDTVTDDLDLSLRLLLSKSRIGILWDPPVMEEAVENLNALLAQRQR
EEEHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
WAEGGLQRFFDYGDQLFTNKIDYLQKFDLTYFFILQYALPTISIFDLVFSIAFLDSPIYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
PISFTAFMLSGIAFWYGSSCKSEVPVLQKSNFLMVFVSVFYLSHWFLVIPWVTIKMSIFP
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHH
KKILWRKTLHTGV
HHHHHHHHHHCCC
>Mature Secondary Structure 
SKGFYKNRRLKSFIFLSACFLVAFIPHANNIENFFYIMLTLSFVIVFYGLIVISRNFKR
CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
NNVLNTLSRRISNKELPVLDILVAARDEENVISRLVERLFSLDYPTNKLNIHIIDDGSSD
HHHHHHHHHHHCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCC
KTPLILDRLSRQYEKLKVISRSPNAGGGKSGALNYALKFTHGEWLLVLDADAELKKDSLI
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCEEEEECCCCCCCHHHHH
RLFSFVEEGDWSAVQLRKSVTNVSKNFLTSCQSMEMAMDAIFQYGRLSVAGVSELRGNGQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHCCCCC
LIKKETLLACGSFNEDTVTDDLDLSLRLLLSKSRIGILWDPPVMEEAVENLNALLAQRQR
EEEHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH
WAEGGLQRFFDYGDQLFTNKIDYLQKFDLTYFFILQYALPTISIFDLVFSIAFLDSPIYW
HHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEE
PISFTAFMLSGIAFWYGSSCKSEVPVLQKSNFLMVFVSVFYLSHWFLVIPWVTIKMSIFP
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHH
KKILWRKTLHTGV
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]