| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123969401
Identifier: 123969401
GI number: 123969401
Start: 1604760
End: 1606313
Strand: Reverse
Name: 123969401
Synonym: A9601_18691
Alternate gene names: NA
Gene position: 1606313-1604760 (Counterclockwise)
Preceding gene: 123969408
Following gene: 123969400
Centisome position: 96.19
GC content: 28.31
Gene sequence:
>1554_bases ATGAAACTTAAATTTGCCTTTTTAAACTTATTTTTAGGTTGTATTTCTCTTTTAGTAATAAACACTAAATTTATTTCAAA TGCAAAAGGAGAAGAATTGCTAAAGGTTGAACTCCATAATGAAATTAAAAAAGGAAAATTTTTAATTGGTTTAAAGCAAT ATTTAGGTGGGGAGAATGATAGTTTTTCGGAGAAAAAGAATATAAACTTTACAACTAATAAAGGTTTTGTAAACTTGATA TCGTCCAACGGTATTAAGCATAAATCAAAACAGATAAATATTACCTGGGCGGATATTCCTGTTAAAAATCCAAAAACAAT TGAAAGAATTGTTTTTGGTCCTTTTGCTAGCTATGAATCGGCAAAAAAACAATCAGAGAAACTAAGAGATAAGGGATTTG ATACGACTGTTGCCTACCCTAAAAATTGGGAAGTATGGATTCCATTTCAAGAGGATCTGCCAGAGTTTGAATTAAAAAAT AAGATTTATAGAAAAATAAAAAATTTTCAAATTACTCCTGTTCTTAGAAATGACTACAGTGGTATAAAACTTGAAGGTCC CATATGTATTTATTCTGAAGAGAAAATAAAAATAAATGGTGTTAATTTTGGCAAAAATTTTTATTTAATAAAGGATTTAT ATGGAACTTGGACCTTAGTTCAAAAAATTGAATTTGATGACTATTTGGCAGGTGTTTTGCCATATGAAATTGGACCGAAT TCTCCTTTAGAAGCACTCAAGGCTCAAGCAGTTATTGCAAGAACTTGGGGCATATTTAATTCTGATAGATTTAATATGGA TAAATATCATTTATGTATAAGCACTCAATGTCAAGTTTATAAGCCTTCTGAAATTTCATATAAAAACGTACAAAAAGCCA TAGACGAAACTTCAAATTTAATTCTCACTCATGAAAATCAACCAATAAATGCTTTTTATCATGGTTCTAATGGTGGAGTA TCTGCTACTGCAGGCGAGTCTTGGCAAATTCAAGATTATTCTTATTTCAATTCAATCATTGATGGCTCTAAATCATTAAA TAACATTTTTAAACTACCAATTACAAATGAATTTTATTTAAATAATTTTTTAGATTTTGATAAGGAACAGTTTTATGGGA GTAATCATTCTCTTTTTCGATGGAATAAGAAAATTTCTAGTCTTGAAATTAAAGAAAAGTTAATTAAAAACAAACTTATA AATATTAATGAAGATGTTTTGGATTTAAATTCTATTGAACGTGGTTCTAGTGGCAGAGTGACAAAATTGGAAATACAAAC TGACAAGGGTAATAAATCTATTGTTCTTGTTAAAGATGATATTCGACGGGTATTAAATTTTATACCTAGTAATTTGTTTA CTATTAATAAATTAAATGATGATTTATGGCTTTTGAGAGGAGGAGGCTTCGGTCATGGTGTAGGTTTATCTCAGTCAGGA GCAATTGAAATGGCTAAATTAGGATTCTCTTATGAACAAATATTGAATCATTACTATCGAAATGCAAAACTAAAAAAATT TGAGATATTGTCTCAATGGAAGTTAAGTAATTAA
Upstream 100 bases:
>100_bases TTTAGACATTTAAGTCAAATGTGTTTAATTAGGATAATCTAAACCTTTATACGCATTGGTGCAAATTAAAGTTTTTAATT GATAAGGAAAGTTCTAATTT
Downstream 100 bases:
>100_bases CAATTTACTTTTATGAGTAAGGGTTTTTATAAAAATCGAAGATTGAAGTCGTTTATATTTCTTAGTGCTTGTTTTTTAGT AGCTTTTATTCCTCACGCTA
Product: putative amidase enhancer
Products: NA
Alternate protein names: H-34 [H]
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MKLKFAFLNLFLGCISLLVINTKFISNAKGEELLKVELHNEIKKGKFLIGLKQYLGGENDSFSEKKNINFTTNKGFVNLI SSNGIKHKSKQINITWADIPVKNPKTIERIVFGPFASYESAKKQSEKLRDKGFDTTVAYPKNWEVWIPFQEDLPEFELKN KIYRKIKNFQITPVLRNDYSGIKLEGPICIYSEEKIKINGVNFGKNFYLIKDLYGTWTLVQKIEFDDYLAGVLPYEIGPN SPLEALKAQAVIARTWGIFNSDRFNMDKYHLCISTQCQVYKPSEISYKNVQKAIDETSNLILTHENQPINAFYHGSNGGV SATAGESWQIQDYSYFNSIIDGSKSLNNIFKLPITNEFYLNNFLDFDKEQFYGSNHSLFRWNKKISSLEIKEKLIKNKLI NINEDVLDLNSIERGSSGRVTKLEIQTDKGNKSIVLVKDDIRRVLNFIPSNLFTINKLNDDLWLLRGGGFGHGVGLSQSG AIEMAKLGFSYEQILNHYYRNAKLKKFEILSQWKLSN
Sequences:
>Translated_517_residues MKLKFAFLNLFLGCISLLVINTKFISNAKGEELLKVELHNEIKKGKFLIGLKQYLGGENDSFSEKKNINFTTNKGFVNLI SSNGIKHKSKQINITWADIPVKNPKTIERIVFGPFASYESAKKQSEKLRDKGFDTTVAYPKNWEVWIPFQEDLPEFELKN KIYRKIKNFQITPVLRNDYSGIKLEGPICIYSEEKIKINGVNFGKNFYLIKDLYGTWTLVQKIEFDDYLAGVLPYEIGPN SPLEALKAQAVIARTWGIFNSDRFNMDKYHLCISTQCQVYKPSEISYKNVQKAIDETSNLILTHENQPINAFYHGSNGGV SATAGESWQIQDYSYFNSIIDGSKSLNNIFKLPITNEFYLNNFLDFDKEQFYGSNHSLFRWNKKISSLEIKEKLIKNKLI NINEDVLDLNSIERGSSGRVTKLEIQTDKGNKSIVLVKDDIRRVLNFIPSNLFTINKLNDDLWLLRGGGFGHGVGLSQSG AIEMAKLGFSYEQILNHYYRNAKLKKFEILSQWKLSN >Mature_517_residues MKLKFAFLNLFLGCISLLVINTKFISNAKGEELLKVELHNEIKKGKFLIGLKQYLGGENDSFSEKKNINFTTNKGFVNLI SSNGIKHKSKQINITWADIPVKNPKTIERIVFGPFASYESAKKQSEKLRDKGFDTTVAYPKNWEVWIPFQEDLPEFELKN KIYRKIKNFQITPVLRNDYSGIKLEGPICIYSEEKIKINGVNFGKNFYLIKDLYGTWTLVQKIEFDDYLAGVLPYEIGPN SPLEALKAQAVIARTWGIFNSDRFNMDKYHLCISTQCQVYKPSEISYKNVQKAIDETSNLILTHENQPINAFYHGSNGGV SATAGESWQIQDYSYFNSIIDGSKSLNNIFKLPITNEFYLNNFLDFDKEQFYGSNHSLFRWNKKISSLEIKEKLIKNKLI NINEDVLDLNSIERGSSGRVTKLEIQTDKGNKSIVLVKDDIRRVLNFIPSNLFTINKLNDDLWLLRGGGFGHGVGLSQSG AIEMAKLGFSYEQILNHYYRNAKLKKFEILSQWKLSN
Specific function: Might be involved in sporulation [H]
COG id: COG2385
COG function: function code D; Sporulation protein and related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013486 - InterPro: IPR013693 [H]
Pfam domain/function: PF08486 SpoIID [H]
EC number: NA
Molecular weight: Translated: 59307; Mature: 59307
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKFAFLNLFLGCISLLVINTKFISNAKGEELLKVELHNEIKKGKFLIGLKQYLGGEND CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHCCEEEEEEHHHHCCCCC SFSEKKNINFTTNKGFVNLISSNGIKHKSKQINITWADIPVKNPKTIERIVFGPFASYES CCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHEEECCCCCHHH AKKQSEKLRDKGFDTTVAYPKNWEVWIPFQEDLPEFELKNKIYRKIKNFQITPVLRNDYS HHHHHHHHHHCCCCCEEECCCCCEEEECHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCC GIKLEGPICIYSEEKIKINGVNFGKNFYLIKDLYGTWTLVQKIEFDDYLAGVLPYEIGPN CEEECCCEEEEECCEEEEEEEECCCCEEEEEECCCCEEEEEEECHHHHHHCCCCCCCCCC SPLEALKAQAVIARTWGIFNSDRFNMDKYHLCISTQCQVYKPSEISYKNVQKAIDETSNL CHHHHHHHHHHEEHHCCCCCCCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHCCCCE ILTHENQPINAFYHGSNGGVSATAGESWQIQDYSYFNSIIDGSKSLNNIFKLPITNEFYL EEEECCCCCEEEEECCCCCEEECCCCCEEECCHHHHHHHHCCCHHHCCEEECCCCCHHHH NNFLDFDKEQFYGSNHSLFRWNKKISSLEIKEKLIKNKLININEDVLDLNSIERGSSGRV HHHHCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCE TKLEIQTDKGNKSIVLVKDDIRRVLNFIPSNLFTINKLNDDLWLLRGGGFGHGVGLSQSG EEEEEEECCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCC AIEMAKLGFSYEQILNHYYRNAKLKKFEILSQWKLSN CEEHHHHCCCHHHHHHHHHHCCCCEEEHHHHHHCCCC >Mature Secondary Structure MKLKFAFLNLFLGCISLLVINTKFISNAKGEELLKVELHNEIKKGKFLIGLKQYLGGEND CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHCCEEEEEEHHHHCCCCC SFSEKKNINFTTNKGFVNLISSNGIKHKSKQINITWADIPVKNPKTIERIVFGPFASYES CCCCCCCCEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHEEECCCCCHHH AKKQSEKLRDKGFDTTVAYPKNWEVWIPFQEDLPEFELKNKIYRKIKNFQITPVLRNDYS HHHHHHHHHHCCCCCEEECCCCCEEEECHHHCCCHHHHHHHHHHHHHCCEEEEEEECCCC GIKLEGPICIYSEEKIKINGVNFGKNFYLIKDLYGTWTLVQKIEFDDYLAGVLPYEIGPN CEEECCCEEEEECCEEEEEEEECCCCEEEEEECCCCEEEEEEECHHHHHHCCCCCCCCCC SPLEALKAQAVIARTWGIFNSDRFNMDKYHLCISTQCQVYKPSEISYKNVQKAIDETSNL CHHHHHHHHHHEEHHCCCCCCCCCCCCEEEEEEECCEEEECCCCCCHHHHHHHHHCCCCE ILTHENQPINAFYHGSNGGVSATAGESWQIQDYSYFNSIIDGSKSLNNIFKLPITNEFYL EEEECCCCCEEEEECCCCCEEECCCCCEEECCHHHHHHHHCCCHHHCCEEECCCCCHHHH NNFLDFDKEQFYGSNHSLFRWNKKISSLEIKEKLIKNKLININEDVLDLNSIERGSSGRV HHHHCCCHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCE TKLEIQTDKGNKSIVLVKDDIRRVLNFIPSNLFTINKLNDDLWLLRGGGFGHGVGLSQSG EEEEEEECCCCCEEEEEHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCC AIEMAKLGFSYEQILNHYYRNAKLKKFEILSQWKLSN CEEHHHHCCCHHHHHHHHHHCCCCEEEHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA