| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969315
Identifier: 123969315
GI number: 123969315
Start: 1516634
End: 1517743
Strand: Reverse
Name: 123969315
Synonym: A9601_17831
Alternate gene names: NA
Gene position: 1517743-1516634 (Counterclockwise)
Preceding gene: 123969316
Following gene: 123969314
Centisome position: 90.89
GC content: 31.35
Gene sequence:
>1110_bases ATGAGTCAAAATAATCTTTATAAGGGTTTTGAGGTGGAACTTTTTACAGGCTCTTTAAATTCTCATATTGGTGTTTCGGA TGAAATTGAGAAAATATTTCCTGATTTTGTGAAAGAGCCAGATAACAGAAACGTTGAATACATAACAACTCCTGAAAAAG ATTACGGTTCTTTATATGAGAAATTAAAAATTCCAAGAAAAAAGTTAAGACGATGGCTTAACAAAAAAGATTTAACAATC ATTCCTTCATCAACTCTTTGTTTTGAACACGATATTCAATTTCAAAGATCTGACATTAACAATCTTTATCATCAATTTAT ACAAGATAATTATGGAACTGCCATAGCAACTTCAAGTGTACATATAAACATAGGAATAGATGATTTAGATAAGCTTTTTG CGGCTATTAGACTTACAAGATCTGAGGCTGCTTTATATCTATCACTAAGTGCTAGTTCACCATTTTTAAATAATGAAATT ACGGAGAATCACTCTCAGAGATGGATGCAGTTTCCTAAAACTCCAAGTAAGGTGCCTTTTTTTGTGAATCATGATTCTTA TATTGCCTGGATAGAGAAAAATATAGCTAATAAAAATATGCAAAATATCAGGCATTTTTGGTCTTCAATCCGACCAAATG GTCCCCAAAGACCTTTAATTCTTGATCGCTTGGAATTAAGAATTTGTGATTTTGTTCACGATATTAATTTGCTTTTAGGG ATAACGGCCATGATAGAACTGAGGATTTTAAATCTTTTTGAAAATATAAATACCTTAGATCCTATGAATGCTAGTACTTT TTCTCTGGATGAGTTATCAGAAATATGTGATCAAAATGAAATTAATGCTGCTAAAGATAGTCTGAATTCAGAGTTAATTC ACTGGGAAGATGGCAAAAGAGTTATTTGTAGTGAATGGATTCAAAACTTATTATCAGATTTATCATCCACAGCAGAAGGC TTTGGTATGAAACATCTTTTAGATCCTATCTATAAAGTGCTTGAAGAAGGCAATCAATCTATGAAATGGATAAATCAATA TGAAAAAGGTCTTTCTATTGAGCAGATAATGAAAATTTCTATCGAAGATATGATTAGGAGTGAGGCCTAG
Upstream 100 bases:
>100_bases AGCTGGAATAGTTGCTGATTCTTTTCCTGAAAATGAATATCAAGAGACGATAAATAAAGCAAAGGGAATACTAAAAGCAC TAGCCTGTTTGGATAAATAA
Downstream 100 bases:
>100_bases AATGTTTGATTATTTAAATAAACTTTGATCTGAACATTTTCACTTATGACATAATGATTATATGGAATCTTTTCGCCAGG TAAAAAATAATAATGTGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 369; Mature: 368
Protein sequence:
>369_residues MSQNNLYKGFEVELFTGSLNSHIGVSDEIEKIFPDFVKEPDNRNVEYITTPEKDYGSLYEKLKIPRKKLRRWLNKKDLTI IPSSTLCFEHDIQFQRSDINNLYHQFIQDNYGTAIATSSVHINIGIDDLDKLFAAIRLTRSEAALYLSLSASSPFLNNEI TENHSQRWMQFPKTPSKVPFFVNHDSYIAWIEKNIANKNMQNIRHFWSSIRPNGPQRPLILDRLELRICDFVHDINLLLG ITAMIELRILNLFENINTLDPMNASTFSLDELSEICDQNEINAAKDSLNSELIHWEDGKRVICSEWIQNLLSDLSSTAEG FGMKHLLDPIYKVLEEGNQSMKWINQYEKGLSIEQIMKISIEDMIRSEA
Sequences:
>Translated_369_residues MSQNNLYKGFEVELFTGSLNSHIGVSDEIEKIFPDFVKEPDNRNVEYITTPEKDYGSLYEKLKIPRKKLRRWLNKKDLTI IPSSTLCFEHDIQFQRSDINNLYHQFIQDNYGTAIATSSVHINIGIDDLDKLFAAIRLTRSEAALYLSLSASSPFLNNEI TENHSQRWMQFPKTPSKVPFFVNHDSYIAWIEKNIANKNMQNIRHFWSSIRPNGPQRPLILDRLELRICDFVHDINLLLG ITAMIELRILNLFENINTLDPMNASTFSLDELSEICDQNEINAAKDSLNSELIHWEDGKRVICSEWIQNLLSDLSSTAEG FGMKHLLDPIYKVLEEGNQSMKWINQYEKGLSIEQIMKISIEDMIRSEA >Mature_368_residues SQNNLYKGFEVELFTGSLNSHIGVSDEIEKIFPDFVKEPDNRNVEYITTPEKDYGSLYEKLKIPRKKLRRWLNKKDLTII PSSTLCFEHDIQFQRSDINNLYHQFIQDNYGTAIATSSVHINIGIDDLDKLFAAIRLTRSEAALYLSLSASSPFLNNEIT ENHSQRWMQFPKTPSKVPFFVNHDSYIAWIEKNIANKNMQNIRHFWSSIRPNGPQRPLILDRLELRICDFVHDINLLLGI TAMIELRILNLFENINTLDPMNASTFSLDELSEICDQNEINAAKDSLNSELIHWEDGKRVICSEWIQNLLSDLSSTAEGF GMKHLLDPIYKVLEEGNQSMKWINQYEKGLSIEQIMKISIEDMIRSEA
Specific function: ATP-dependent carboxylate-amine ligase [H]
COG id: COG2170
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carboxylate-amine ligase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011793 - InterPro: IPR006336 [H]
Pfam domain/function: PF04107 GCS2 [H]
EC number: NA
Molecular weight: Translated: 42735; Mature: 42604
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQNNLYKGFEVELFTGSLNSHIGVSDEIEKIFPDFVKEPDNRNVEYITTPEKDYGSLYE CCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH KLKIPRKKLRRWLNKKDLTIIPSSTLCFEHDIQFQRSDINNLYHQFIQDNYGTAIATSSV HHCCCHHHHHHHCCCCCEEEECCCCEEEHHCCHHHHHHHHHHHHHHHHCCCCCEEEECEE HINIGIDDLDKLFAAIRLTRSEAALYLSLSASSPFLNNEITENHSQRWMQFPKTPSKVPF EEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCE FVNHDSYIAWIEKNIANKNMQNIRHFWSSIRPNGPQRPLILDRLELRICDFVHDINLLLG EECCCCEEEHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ITAMIELRILNLFENINTLDPMNASTFSLDELSEICDQNEINAAKDSLNSELIHWEDGKR HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCE VICSEWIQNLLSDLSSTAEGFGMKHLLDPIYKVLEEGNQSMKWINQYEKGLSIEQIMKIS EHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH IEDMIRSEA HHHHHHCCC >Mature Secondary Structure SQNNLYKGFEVELFTGSLNSHIGVSDEIEKIFPDFVKEPDNRNVEYITTPEKDYGSLYE CCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHH KLKIPRKKLRRWLNKKDLTIIPSSTLCFEHDIQFQRSDINNLYHQFIQDNYGTAIATSSV HHCCCHHHHHHHCCCCCEEEECCCCEEEHHCCHHHHHHHHHHHHHHHHCCCCCEEEECEE HINIGIDDLDKLFAAIRLTRSEAALYLSLSASSPFLNNEITENHSQRWMQFPKTPSKVPF EEEECHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCE FVNHDSYIAWIEKNIANKNMQNIRHFWSSIRPNGPQRPLILDRLELRICDFVHDINLLLG EECCCCEEEHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH ITAMIELRILNLFENINTLDPMNASTFSLDELSEICDQNEINAAKDSLNSELIHWEDGKR HHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCEEEECCCCE VICSEWIQNLLSDLSSTAEGFGMKHLLDPIYKVLEEGNQSMKWINQYEKGLSIEQIMKIS EHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHH IEDMIRSEA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA