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The map label for this gene is 123969305

Identifier: 123969305

GI number: 123969305

Start: 1505093

End: 1506598

Strand: Reverse

Name: 123969305

Synonym: A9601_17731

Alternate gene names: NA

Gene position: 1506598-1505093 (Counterclockwise)

Preceding gene: 123969307

Following gene: 123969303

Centisome position: 90.22

GC content: 33.13

Gene sequence:

>1506_bases
ATGAGAAATTCTGAAGTTATTGTTATTGGCGCCGGTATAGCAGGACTAACTTCTGCAGCGATTTTATCAAAACAAGGCTT
ATCAGTGACCTTAATCGAATCTCATACTCAAGCCGGAGGATGTGCCGGTACTTTTAAAAGAAAGAATTATACTTTCGATG
TTGGCGCAACTCAGGTTGCAGGTTTAGAGAAGGGAGGAATACATTATAGAATTTTTGATTTTTTAGATATTCCATCTCCA
GAAGCCACAATTTTAGACCCTGCTTGCATTGTTGATTTAAATGATGGTGGTAATCCTATACCTATTTGGTATGAAAAAAG
TAAATGGATTGTTGAACGAGAAATGCAGTTTCCTGGGAGTCAAAGATTTTGGAAACTTTGTTCCCTAATACATGAAAGTA
ATTGGATATTTGCTAATAACAATCCTGTATTACCAATAAGCAATTTTTGGGATTTTTCTCAACTTCTTAAAGCACTAGTT
CCTTCAAACCTTGTCACAGGTATCTTACTTAAATCTACTATTTTTGATCTATTGCGGATATGTGGATTATCCAAGAATGA
GCGCTTGATTAAATTCTTAAATCTTCAACTAAAACTTTATTCTCAAGAGGATGTTTATAATACTGCTGCATTATATGGAT
CTACTGTTCTTCAGATGTGTCAACAGCCATATGGTCTGTGGCATCTTAAAAAATCTATGCAGTCTTTAAGTGAATCATTA
GAAAGTTCATTGATTAAAACTGGAGTTAATTTATTTTTTGGACAAGAAGTAAATTCTATAACTTTTGACGACGTAAATAT
GTGTTGGCAAGTATCTGCTAATTCGAAAAAAAAATCATTTATTTACCAAGCAAAAGATGTGATTTATACTGCCCCTCCAC
AGTCTTTGCTCAAGCATTTGAAAGATCCTTTAGAAAGAAAAAAAAATTATAAAAATCGACTTAATAATTTGCCTAATCCA
AGTGGAGCTGTAGTTTTTTATTCAGCCTTAAAAAAGGAACATATTAAAAAAACATTCTCCAATCATTATCAATTTGTTTC
GAAAGAATTTTGTTCCTTATTTGTATCAATTAGTGATGATGGTGATGGAAGAGCGCCAAAAGGTGAAGTTACTTTAATTG
CCAGTATCTTTACCAAAACTAAAGATTGGGTTGACCTAGATAAACAAACTTATTTAAAGAAGAAAAATAGTTTCATGAAA
AAAATATCCCTTGAATTGGAAAGTCAATTTGATATTGATCCTGATAAATGGCTACATAGGGAATTAGCAACTCCATTGGG
CTTTGAAAGATGGACAAAAAGACCTAATGGAATAGTAGGGGGGCTTGGTCAAAATCCAGATATTTTTGGTTTATTTGGAT
TATCAAGTAGGACACCTTTTGAAGGTTTATGGTTATGTGGAGATTCGATTTATCCAGGAGAGGGGACTGCAGGTGTTAGT
CAGTCTGCATTAATGGTTTCAAGGCAAATTTTAGCTTCCAAAGGTGTAAAAAATTTTAGTTTATAA

Upstream 100 bases:

>100_bases
AATATCACCACCATGTACTTGTTCAATACTTTTTGGATAGGTTTCACCTAATTCTTCACAAATTTCGTTAATTTCAATAG
GAGATAATTTTTGCATTTTA

Downstream 100 bases:

>100_bases
AATTTTGTCTGTTTTCTTTTGCTTCAGCAAGTTTTTTAGAAAGTAAATCCCAATTTTTTTCTTTAATAAGAGATTCCAGT
ATGTTTAGCTTATTTTTAAA

Product: phytoene dehydrogenase

Products: NA

Alternate protein names: FAD Dependent Oxidoreductase; C-3 4' Desaturase CrtD; Phytoene Dehydrogenase; Carotenoid Isomerase; Phytoene Dehydrogenase ; Lycopene Cyclase; Phytoene Dehydrogenase And Related Protein; Phytoene Dehydrogenase And Related Proteins-Like; Phytoene Dehydrogenase And Related Proteins; Phytoene Dehydrogenase-Like; Phytoene Dehydrogenase-Related Protein; Phytoene Dehydrogenase/Carotenoid Isomerase

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MRNSEVIVIGAGIAGLTSAAILSKQGLSVTLIESHTQAGGCAGTFKRKNYTFDVGATQVAGLEKGGIHYRIFDFLDIPSP
EATILDPACIVDLNDGGNPIPIWYEKSKWIVEREMQFPGSQRFWKLCSLIHESNWIFANNNPVLPISNFWDFSQLLKALV
PSNLVTGILLKSTIFDLLRICGLSKNERLIKFLNLQLKLYSQEDVYNTAALYGSTVLQMCQQPYGLWHLKKSMQSLSESL
ESSLIKTGVNLFFGQEVNSITFDDVNMCWQVSANSKKKSFIYQAKDVIYTAPPQSLLKHLKDPLERKKNYKNRLNNLPNP
SGAVVFYSALKKEHIKKTFSNHYQFVSKEFCSLFVSISDDGDGRAPKGEVTLIASIFTKTKDWVDLDKQTYLKKKNSFMK
KISLELESQFDIDPDKWLHRELATPLGFERWTKRPNGIVGGLGQNPDIFGLFGLSSRTPFEGLWLCGDSIYPGEGTAGVS
QSALMVSRQILASKGVKNFSL

Sequences:

>Translated_501_residues
MRNSEVIVIGAGIAGLTSAAILSKQGLSVTLIESHTQAGGCAGTFKRKNYTFDVGATQVAGLEKGGIHYRIFDFLDIPSP
EATILDPACIVDLNDGGNPIPIWYEKSKWIVEREMQFPGSQRFWKLCSLIHESNWIFANNNPVLPISNFWDFSQLLKALV
PSNLVTGILLKSTIFDLLRICGLSKNERLIKFLNLQLKLYSQEDVYNTAALYGSTVLQMCQQPYGLWHLKKSMQSLSESL
ESSLIKTGVNLFFGQEVNSITFDDVNMCWQVSANSKKKSFIYQAKDVIYTAPPQSLLKHLKDPLERKKNYKNRLNNLPNP
SGAVVFYSALKKEHIKKTFSNHYQFVSKEFCSLFVSISDDGDGRAPKGEVTLIASIFTKTKDWVDLDKQTYLKKKNSFMK
KISLELESQFDIDPDKWLHRELATPLGFERWTKRPNGIVGGLGQNPDIFGLFGLSSRTPFEGLWLCGDSIYPGEGTAGVS
QSALMVSRQILASKGVKNFSL
>Mature_501_residues
MRNSEVIVIGAGIAGLTSAAILSKQGLSVTLIESHTQAGGCAGTFKRKNYTFDVGATQVAGLEKGGIHYRIFDFLDIPSP
EATILDPACIVDLNDGGNPIPIWYEKSKWIVEREMQFPGSQRFWKLCSLIHESNWIFANNNPVLPISNFWDFSQLLKALV
PSNLVTGILLKSTIFDLLRICGLSKNERLIKFLNLQLKLYSQEDVYNTAALYGSTVLQMCQQPYGLWHLKKSMQSLSESL
ESSLIKTGVNLFFGQEVNSITFDDVNMCWQVSANSKKKSFIYQAKDVIYTAPPQSLLKHLKDPLERKKNYKNRLNNLPNP
SGAVVFYSALKKEHIKKTFSNHYQFVSKEFCSLFVSISDDGDGRAPKGEVTLIASIFTKTKDWVDLDKQTYLKKKNSFMK
KISLELESQFDIDPDKWLHRELATPLGFERWTKRPNGIVGGLGQNPDIFGLFGLSSRTPFEGLWLCGDSIYPGEGTAGVS
QSALMVSRQILASKGVKNFSL

Specific function: Unknown

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56087; Mature: 56087

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNSEVIVIGAGIAGLTSAAILSKQGLSVTLIESHTQAGGCAGTFKRKNYTFDVGATQVA
CCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCHHCC
GLEKGGIHYRIFDFLDIPSPEATILDPACIVDLNDGGNPIPIWYEKSKWIVEREMQFPGS
CCCCCCEEEEEEEEECCCCCCCEEECCEEEEEECCCCCEEEEEECCCCEEEEHHHCCCCH
QRFWKLCSLIHESNWIFANNNPVLPISNFWDFSQLLKALVPSNLVTGILLKSTIFDLLRI
HHHHHHHHHHHCCCEEEECCCCEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
CGLSKNERLIKFLNLQLKLYSQEDVYNTAALYGSTVLQMCQQPYGLWHLKKSMQSLSESL
HCCCCCHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ESSLIKTGVNLFFGQEVNSITFDDVNMCWQVSANSKKKSFIYQAKDVIYTAPPQSLLKHL
HHHHHHHCCCEEECCCCCCEEECCCCEEEEECCCCCHHHHHEEECCEEEECCHHHHHHHH
KDPLERKKNYKNRLNNLPNPSGAVVFYSALKKEHIKKTFSNHYQFVSKEFCSLFVSISDD
HHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
GDGRAPKGEVTLIASIFTKTKDWVDLDKQTYLKKKNSFMKKISLELESQFDIDPDKWLHR
CCCCCCCCCEEEEEHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ELATPLGFERWTKRPNGIVGGLGQNPDIFGLFGLSSRTPFEGLWLCGDSIYPGEGTAGVS
HHCCCCCHHHHCCCCCCCEECCCCCCCEEEEECCCCCCCCCEEEEECCEECCCCCCCCCC
QSALMVSRQILASKGVKNFSL
HHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRNSEVIVIGAGIAGLTSAAILSKQGLSVTLIESHTQAGGCAGTFKRKNYTFDVGATQVA
CCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCCHHCC
GLEKGGIHYRIFDFLDIPSPEATILDPACIVDLNDGGNPIPIWYEKSKWIVEREMQFPGS
CCCCCCEEEEEEEEECCCCCCCEEECCEEEEEECCCCCEEEEEECCCCEEEEHHHCCCCH
QRFWKLCSLIHESNWIFANNNPVLPISNFWDFSQLLKALVPSNLVTGILLKSTIFDLLRI
HHHHHHHHHHHCCCEEEECCCCEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
CGLSKNERLIKFLNLQLKLYSQEDVYNTAALYGSTVLQMCQQPYGLWHLKKSMQSLSESL
HCCCCCHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
ESSLIKTGVNLFFGQEVNSITFDDVNMCWQVSANSKKKSFIYQAKDVIYTAPPQSLLKHL
HHHHHHHCCCEEECCCCCCEEECCCCEEEEECCCCCHHHHHEEECCEEEECCHHHHHHHH
KDPLERKKNYKNRLNNLPNPSGAVVFYSALKKEHIKKTFSNHYQFVSKEFCSLFVSISDD
HHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCC
GDGRAPKGEVTLIASIFTKTKDWVDLDKQTYLKKKNSFMKKISLELESQFDIDPDKWLHR
CCCCCCCCCEEEEEHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
ELATPLGFERWTKRPNGIVGGLGQNPDIFGLFGLSSRTPFEGLWLCGDSIYPGEGTAGVS
HHCCCCCHHHHCCCCCCCEECCCCCCCEEEEECCCCCCCCCEEEEECCEECCCCCCCCCC
QSALMVSRQILASKGVKNFSL
HHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA