| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969307
Identifier: 123969307
GI number: 123969307
Start: 1507489
End: 1507854
Strand: Reverse
Name: 123969307
Synonym: A9601_17751
Alternate gene names: NA
Gene position: 1507854-1507489 (Counterclockwise)
Preceding gene: 123969309
Following gene: 123969305
Centisome position: 90.3
GC content: 39.34
Gene sequence:
>366_bases ATGAGTGATAACACTCCAGAGTCAAACCAAGACTCCGGCTCCGATACAAGCTCAGAAACCAAAAGTTTTTCAGAGAAGTA CTCTGATGTTATGGGAAAAGTCAACGAAACCCTTGGTAATGTTGATTGGACTCAAATGGGTAAATACGGCAAGGCGGCAG GCATAATTGCTGTTGTCGTAATAGCTCAGATAATAATTAAAGTTGTCATTGACACGATAAACTTTTTCCCAATTCTTCCT GGTTTACTTGAACTACTAGGCGTAATTGTTGTCGGTCAATGGAGCTGGCAAAATCTTCGTACCAGTGAAAATCGTGAAGC TGTTTTAGATAAGGTACAAAATCTTAAGAAGACATATTTAGGGTAG
Upstream 100 bases:
>100_bases AATACAAAATGTTTCGGTTCGGAATTTTGCACAACAAAAAGGTAGTCAATAGACGTTTTTTCCGATACTGTCTGGTTCAT ATATTAAGTTTACTGAATTC
Downstream 100 bases:
>100_bases TTTAAGATTACATATTGAGTATTTCTTTTACGTAATCTTTAACTTGTTTTAAATACCCTCCTCCAAACATATTGGCGTGA TTCAATATGTGATAAAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSDNTPESNQDSGSDTSSETKSFSEKYSDVMGKVNETLGNVDWTQMGKYGKAAGIIAVVVIAQIIIKVVIDTINFFPILP GLLELLGVIVVGQWSWQNLRTSENREAVLDKVQNLKKTYLG
Sequences:
>Translated_121_residues MSDNTPESNQDSGSDTSSETKSFSEKYSDVMGKVNETLGNVDWTQMGKYGKAAGIIAVVVIAQIIIKVVIDTINFFPILP GLLELLGVIVVGQWSWQNLRTSENREAVLDKVQNLKKTYLG >Mature_120_residues SDNTPESNQDSGSDTSSETKSFSEKYSDVMGKVNETLGNVDWTQMGKYGKAAGIIAVVVIAQIIIKVVIDTINFFPILPG LLELLGVIVVGQWSWQNLRTSENREAVLDKVQNLKKTYLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13294; Mature: 13163
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNTPESNQDSGSDTSSETKSFSEKYSDVMGKVNETLGNVDWTQMGKYGKAAGIIAVVV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHH IAQIIIKVVIDTINFFPILPGLLELLGVIVVGQWSWQNLRTSENREAVLDKVQNLKKTYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC G C >Mature Secondary Structure SDNTPESNQDSGSDTSSETKSFSEKYSDVMGKVNETLGNVDWTQMGKYGKAAGIIAVVV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHHHHHHH IAQIIIKVVIDTINFFPILPGLLELLGVIVVGQWSWQNLRTSENREAVLDKVQNLKKTYL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHC G C
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA