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The map label for this gene is hycB

Identifier: 123969299

GI number: 123969299

Start: 1499266

End: 1500273

Strand: Direct

Name: hycB

Synonym: A9601_17671

Alternate gene names: NA

Gene position: 1499266-1500273 (Clockwise)

Preceding gene: 123969298

Following gene: 123969300

Centisome position: 89.78

GC content: 33.73

Gene sequence:

>1008_bases
TTGATTAAAACCAAGAATAAAAAAGATAAATGGATTAAGTTAATTTGTGGTGCCAGTAATGAAGATATTGTTGCCATAGA
AGATTTATGTGCAATTTATACTGCTGCTGGTGTCGACTACATAGATGTTGCAGCAGAAGAATCTATAGTTTATGCAGCAA
AAAAAGGAATCGATTGGGCAAAAAAAGTCTTTAAAAACTCCCCTGGATTAATGATAAGCATTAGTGATGGTAATGATATC
CACTTTCGAAAAGCAAAATTTGATCCATTGAAATGTCCCCCTAGTTGTCCAAGACCATGCGAAAAAGTATGCCCCACATT
TGCAATTGATAATTTCGGAATTAAAGAGAGTAAATGTTATGGATGCGGAAGATGTTTAAATAGTTGTCCTCTAAATCTAA
TTAGTGAATATGAATATAATTTGTCAAAAAATAATTTAGCATCAACTCTTCAAAAAATAAGGCCTAATGCAGTAGAAATT
CATACAGAAATCAATCGCCTAGATTCTTTTACAAAAGTTGTAAGTATCCTTACAAGTTCTGGAATGAAATTAGACAAGAT
ATCTATCAGTTGTGGATTAAATCAATCTTTCAAAAAAGCCCAAGAGCCTGATGATCTTTTGAAAGCTCTGTGGGAAAGAT
ATGAAATTCTTAAAAAACTTGATATTCCCCTTATTTGGCAACTAGATGGAAGGCCAATGTCTGGAGATCTTGCTCCTTCA
ACAAGTAGAGATGCTGTTAAGTTGTTTGAAAAAATCGGTTCAGATCTTCCACCTGGATTAATTCAATTAGCAGGAGGAAC
AAATGAAAAAACTCATGAATTGTTGAATTCAAACAATCTCCCAGATGGAATAGCATTTGGAAGTGCTGCAAGAAAAATTA
TGCAGCCCCTTATTGAATTTGCTCATAAAAATGACAAAAAACTCTATGAGTATCCTGAAATAATGGGTTTGGCGATCCAA
AAAGCTCAGAAATTTCTAGAGCCATGGAAATCGCGCTCATTCAAATAA

Upstream 100 bases:

>100_bases
ATAATAAACTAACAATAGTTGTTGAAATGGGGGGTTCAAGAAAACTTGAATGGAAACCATTAAGTAATTATATTTTGGAT
GAATTTGAAAGTTAAATTGT

Downstream 100 bases:

>100_bases
TATTTTTATTTTTCAAAACTAGCGCCATGTTTATAAAAAATTTGTATTTTTTGGATAGAAAAAAATCTTTTCATGTATTA
AAATGATAATTCAATGGGCC

Product: Fe-S-cluster-containing hydrogenase components 2

Products: NA

Alternate protein names: LdpA Protein; Ferredoxin; 4Fe-4S Ferredoxin; Light Dependent Period; Ferredoxin 4Fe-4S Type; Alpha-Helical Ferredoxin

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MIKTKNKKDKWIKLICGASNEDIVAIEDLCAIYTAAGVDYIDVAAEESIVYAAKKGIDWAKKVFKNSPGLMISISDGNDI
HFRKAKFDPLKCPPSCPRPCEKVCPTFAIDNFGIKESKCYGCGRCLNSCPLNLISEYEYNLSKNNLASTLQKIRPNAVEI
HTEINRLDSFTKVVSILTSSGMKLDKISISCGLNQSFKKAQEPDDLLKALWERYEILKKLDIPLIWQLDGRPMSGDLAPS
TSRDAVKLFEKIGSDLPPGLIQLAGGTNEKTHELLNSNNLPDGIAFGSAARKIMQPLIEFAHKNDKKLYEYPEIMGLAIQ
KAQKFLEPWKSRSFK

Sequences:

>Translated_335_residues
MIKTKNKKDKWIKLICGASNEDIVAIEDLCAIYTAAGVDYIDVAAEESIVYAAKKGIDWAKKVFKNSPGLMISISDGNDI
HFRKAKFDPLKCPPSCPRPCEKVCPTFAIDNFGIKESKCYGCGRCLNSCPLNLISEYEYNLSKNNLASTLQKIRPNAVEI
HTEINRLDSFTKVVSILTSSGMKLDKISISCGLNQSFKKAQEPDDLLKALWERYEILKKLDIPLIWQLDGRPMSGDLAPS
TSRDAVKLFEKIGSDLPPGLIQLAGGTNEKTHELLNSNNLPDGIAFGSAARKIMQPLIEFAHKNDKKLYEYPEIMGLAIQ
KAQKFLEPWKSRSFK
>Mature_335_residues
MIKTKNKKDKWIKLICGASNEDIVAIEDLCAIYTAAGVDYIDVAAEESIVYAAKKGIDWAKKVFKNSPGLMISISDGNDI
HFRKAKFDPLKCPPSCPRPCEKVCPTFAIDNFGIKESKCYGCGRCLNSCPLNLISEYEYNLSKNNLASTLQKIRPNAVEI
HTEINRLDSFTKVVSILTSSGMKLDKISISCGLNQSFKKAQEPDDLLKALWERYEILKKLDIPLIWQLDGRPMSGDLAPS
TSRDAVKLFEKIGSDLPPGLIQLAGGTNEKTHELLNSNNLPDGIAFGSAARKIMQPLIEFAHKNDKKLYEYPEIMGLAIQ
KAQKFLEPWKSRSFK

Specific function: Unknown

COG id: COG1142

COG function: function code C; Fe-S-cluster-containing hydrogenase components 2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37380; Mature: 37380

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTKNKKDKWIKLICGASNEDIVAIEDLCAIYTAAGVDYIDVAAEESIVYAAKKGIDWA
CCCCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHCCHHH
KKVFKNSPGLMISISDGNDIHFRKAKFDPLKCPPSCPRPCEKVCPTFAIDNFGIKESKCY
HHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCEECCCCCCCHHHH
GCGRCLNSCPLNLISEYEYNLSKNNLASTLQKIRPNAVEIHTEINRLDSFTKVVSILTSS
HHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHC
GMKLDKISISCGLNQSFKKAQEPDDLLKALWERYEILKKLDIPLIWQLDGRPMSGDLAPS
CCEEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
TSRDAVKLFEKIGSDLPPGLIQLAGGTNEKTHELLNSNNLPDGIAFGSAARKIMQPLIEF
CCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
AHKNDKKLYEYPEIMGLAIQKAQKFLEPWKSRSFK
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIKTKNKKDKWIKLICGASNEDIVAIEDLCAIYTAAGVDYIDVAAEESIVYAAKKGIDWA
CCCCCCCCCCEEEEEECCCCCCEEHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHCCHHH
KKVFKNSPGLMISISDGNDIHFRKAKFDPLKCPPSCPRPCEKVCPTFAIDNFGIKESKCY
HHHHCCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCEECCCCCCCHHHH
GCGRCLNSCPLNLISEYEYNLSKNNLASTLQKIRPNAVEIHTEINRLDSFTKVVSILTSS
HHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHC
GMKLDKISISCGLNQSFKKAQEPDDLLKALWERYEILKKLDIPLIWQLDGRPMSGDLAPS
CCEEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCC
TSRDAVKLFEKIGSDLPPGLIQLAGGTNEKTHELLNSNNLPDGIAFGSAARKIMQPLIEF
CCHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHH
AHKNDKKLYEYPEIMGLAIQKAQKFLEPWKSRSFK
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA