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The map label for this gene is ndhN [H]

Identifier: 123969298

GI number: 123969298

Start: 1498784

End: 1499260

Strand: Direct

Name: ndhN [H]

Synonym: A9601_17661

Alternate gene names: 123969298

Gene position: 1498784-1499260 (Clockwise)

Preceding gene: 123969268

Following gene: 123969299

Centisome position: 89.75

GC content: 35.22

Gene sequence:

>477_bases
ATGCCATTACTTCTCTCAGGGAAAAAGTTTCATAACGATTTAAAAACTAACAAATGTCTCGCAATATTTGCTCCTCTTGA
AGGTGGTTATGAAACTCGTCTTTTGAGGAGAATGAGGGCCAAAGGCTTTAAAACTTTTATAACTTCAGCAAGAGGGCTTG
GAGATCCAGAAGTTTTCTTGCTCAAATTGCATGGCGTTAGACCACCTCACCTTGGTCATCAAAGTGTAGGAAGAAACGGA
GCGCTTGGGGAAGTTCAGCAAGTAATCCCACAAGCTTCTGAGTTATTTAATGAAAATGATAAAAATAAATTACTTTGGTT
ATTAGAAGGTCAAGTATTATCCCAGTCTGAATTAGAAAGCTTAATAGAGATTTGTACTAACGATAATAAACTAACAATAG
TTGTTGAAATGGGGGGTTCAAGAAAACTTGAATGGAAACCATTAAGTAATTATATTTTGGATGAATTTGAAAGTTAA

Upstream 100 bases:

>100_bases
AGAGGCTCGGCTAGCTTGCGAGCTTAAAAATTCACTGAGTTACAATTGTACATCATCAAGTACCATAAAATAAAATAAAA
TAGAAATAAAGGAAATTTTT

Downstream 100 bases:

>100_bases
ATTGTTTGATTAAAACCAAGAATAAAAAAGATAAATGGATTAAGTTAATTTGTGGTGCCAGTAATGAAGATATTGTTGCC
ATAGAAGATTTATGTGCAAT

Product: NADH dehydrogenase I subunit N

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I subunit N; NDH-1 subunit N; NDH-N [H]

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MPLLLSGKKFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRPPHLGHQSVGRNG
ALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTNDNKLTIVVEMGGSRKLEWKPLSNYILDEFES

Sequences:

>Translated_158_residues
MPLLLSGKKFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRPPHLGHQSVGRNG
ALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTNDNKLTIVVEMGGSRKLEWKPLSNYILDEFES
>Mature_157_residues
PLLLSGKKFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFLLKLHGVRPPHLGHQSVGRNGA
LGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELESLIEICTNDNKLTIVVEMGGSRKLEWKPLSNYILDEFES

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhN subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020874 [H]

Pfam domain/function: PF11909 NdhN [H]

EC number: 1.6.5.3

Molecular weight: Translated: 17772; Mature: 17641

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLLSGKKFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFL
CCEEECCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
LKLHGVRPPHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELES
EEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH
LIEICTNDNKLTIVVEMGGSRKLEWKPLSNYILDEFES
HHHHHCCCCEEEEEEECCCCCEEECCCHHHHHHHHCCC
>Mature Secondary Structure 
PLLLSGKKFHNDLKTNKCLAIFAPLEGGYETRLLRRMRAKGFKTFITSARGLGDPEVFL
CEEECCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
LKLHGVRPPHLGHQSVGRNGALGEVQQVIPQASELFNENDKNKLLWLLEGQVLSQSELES
EEECCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHH
LIEICTNDNKLTIVVEMGGSRKLEWKPLSNYILDEFES
HHHHHCCCCEEEEEEECCCCCEEECCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA