| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969266
Identifier: 123969266
GI number: 123969266
Start: 1478781
End: 1480142
Strand: Reverse
Name: 123969266
Synonym: A9601_17341
Alternate gene names: NA
Gene position: 1480142-1478781 (Counterclockwise)
Preceding gene: 123969267
Following gene: 123969265
Centisome position: 88.64
GC content: 31.06
Gene sequence:
>1362_bases ATGTTCAAAAAGATTGAAATTTGGATACTTTATTTAATTGTTTTTTTAGGCATACCCATAACAATTGGTTTTGGTGTACT TGTCAGGCAAGAATTGATAGGGAGCACCAAATTAGGAAGGGTTTCTAAAACTGCATTATTTCTTGCAGAAATACCTATGA ATTTAAAGAAGATATTTTTGAGCAATCAACTACAAGTTGCTGGAGAAAGATTTCCACTATTAGATAACTTTAATGGTACG CCTAATTCTAGTGAATCTTATCTTTTACTTTCCAGGTATGACCGAGATTTAAAAGAGGGAATTGTTGAACTTGTAGATTT AATGAACTTTAAAGTGTTACATACCTGGAATCCAGATATTAATAAATTTAACGACTCCGTAAAGCAGAGTGGTGAGTTCA AATATTTAAATAGGGATGGAAATAATTCAAGATTTTTACTTCGTCATCCTCTTCTTCTTAAAGATGGTGGTTTGGTTTTT CAAGATTCAAGTCCTTTAATGAAAATAGATGAATGTTCTAATTTGATTTTTCAAAATACTCAGGATAGATTTCATCATTC AATTGAAACAGATATTGATGGCAATATTTGGGTCCCCTCATATATGTATCCCCAAACTCTTCCTGTTGAAAAAGTAGGTA GAGATATTGTTGAGGAGAATGGATATATTGACGATGGAATTGTGAAATTATCTCCTAATGGAGAAGTTTTATTTGAAAAA TCTGTATCACAAATATTTATAGATAATAATCTAGAATCTCTTTTATTCTCTTCAGGAGATTATAGGTTTGTGAAAGATCC AATTCATCTTAACGATATACAACCGGTTGACTTTGATGGAGAGTATTGGAAGAAGGGAGACGTATTTTTATCTATAAACT CTCAATCAATGCTTATTTTATATAGACCGTTAACTAATCAAATTATTTGGCATGGTAAAGGACCTTTTTCTCGAGTACAT GATGTAGATATATTAGATGATTACAGAATATCTGCTTTTCATAATAACTACAAATTCTTTGTAAACACTAATGTGGTAGA CGGTAACAATGAGGTAATTATTTACGACTTTAATACTAATAAATATTCAACTTATCTCGAAGAAAGTTTAGTTGAAAATG ATGTCAGAACAAAGACTAACGGAAGAAGTCAGATTTTACCGAACGGTGATTTATTTATTGAAGAAACAGATTTTGGAAGA ACACTATACTTTGATTCAGATGGTTCACTTAGGTGGACGCACGTAAATCGTGCAGATAATGGAAATGTTTATGGTATTGG TTGGTCCAGAATTCTTTATACCCCAGAAAGTATTAAAATTGTGAAAAATTTCTTAGAAGCAAGAGGTAAATGCAATGATT AA
Upstream 100 bases:
>100_bases GATTATGGTGGGTAAAATATATTATTAAATTGATAAAAAAATTTTTTACAGGATGGATGTTATAGTACCAAAAAAAATAA TATAAATAATACGAACTTTT
Downstream 100 bases:
>100_bases TGCAGTAATATACATCTCTCTGTCTATTAACTTTTCTCAATATTTTTCTTATATAGGTCCTGGAATGGGCGGTGGAGTTA TTGCTGCTATTTTTGGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MFKKIEIWILYLIVFLGIPITIGFGVLVRQELIGSTKLGRVSKTALFLAEIPMNLKKIFLSNQLQVAGERFPLLDNFNGT PNSSESYLLLSRYDRDLKEGIVELVDLMNFKVLHTWNPDINKFNDSVKQSGEFKYLNRDGNNSRFLLRHPLLLKDGGLVF QDSSPLMKIDECSNLIFQNTQDRFHHSIETDIDGNIWVPSYMYPQTLPVEKVGRDIVEENGYIDDGIVKLSPNGEVLFEK SVSQIFIDNNLESLLFSSGDYRFVKDPIHLNDIQPVDFDGEYWKKGDVFLSINSQSMLILYRPLTNQIIWHGKGPFSRVH DVDILDDYRISAFHNNYKFFVNTNVVDGNNEVIIYDFNTNKYSTYLEESLVENDVRTKTNGRSQILPNGDLFIEETDFGR TLYFDSDGSLRWTHVNRADNGNVYGIGWSRILYTPESIKIVKNFLEARGKCND
Sequences:
>Translated_453_residues MFKKIEIWILYLIVFLGIPITIGFGVLVRQELIGSTKLGRVSKTALFLAEIPMNLKKIFLSNQLQVAGERFPLLDNFNGT PNSSESYLLLSRYDRDLKEGIVELVDLMNFKVLHTWNPDINKFNDSVKQSGEFKYLNRDGNNSRFLLRHPLLLKDGGLVF QDSSPLMKIDECSNLIFQNTQDRFHHSIETDIDGNIWVPSYMYPQTLPVEKVGRDIVEENGYIDDGIVKLSPNGEVLFEK SVSQIFIDNNLESLLFSSGDYRFVKDPIHLNDIQPVDFDGEYWKKGDVFLSINSQSMLILYRPLTNQIIWHGKGPFSRVH DVDILDDYRISAFHNNYKFFVNTNVVDGNNEVIIYDFNTNKYSTYLEESLVENDVRTKTNGRSQILPNGDLFIEETDFGR TLYFDSDGSLRWTHVNRADNGNVYGIGWSRILYTPESIKIVKNFLEARGKCND >Mature_453_residues MFKKIEIWILYLIVFLGIPITIGFGVLVRQELIGSTKLGRVSKTALFLAEIPMNLKKIFLSNQLQVAGERFPLLDNFNGT PNSSESYLLLSRYDRDLKEGIVELVDLMNFKVLHTWNPDINKFNDSVKQSGEFKYLNRDGNNSRFLLRHPLLLKDGGLVF QDSSPLMKIDECSNLIFQNTQDRFHHSIETDIDGNIWVPSYMYPQTLPVEKVGRDIVEENGYIDDGIVKLSPNGEVLFEK SVSQIFIDNNLESLLFSSGDYRFVKDPIHLNDIQPVDFDGEYWKKGDVFLSINSQSMLILYRPLTNQIIWHGKGPFSRVH DVDILDDYRISAFHNNYKFFVNTNVVDGNNEVIIYDFNTNKYSTYLEESLVENDVRTKTNGRSQILPNGDLFIEETDFGR TLYFDSDGSLRWTHVNRADNGNVYGIGWSRILYTPESIKIVKNFLEARGKCND
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52198; Mature: 52198
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKIEIWILYLIVFLGIPITIGFGVLVRQELIGSTKLGRVSKTALFLAEIPMNLKKIFL CCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCCCHHHHHH SNQLQVAGERFPLLDNFNGTPNSSESYLLLSRYDRDLKEGIVELVDLMNFKVLHTWNPDI CCCEEECCCCCCCCCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHCEEEEEECCCCH NKFNDSVKQSGEFKYLNRDGNNSRFLLRHPLLLKDGGLVFQDSSPLMKIDECSNLIFQNT HHHHHHHHCCCCEEEEECCCCCCEEEEECCEEEECCCEEEECCCCCEEHHHHHHHHHCCC QDRFHHSIETDIDGNIWVPSYMYPQTLPVEKVGRDIVEENGYIDDGIVKLSPNGEVLFEK HHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEC SVSQIFIDNNLESLLFSSGDYRFVKDPIHLNDIQPVDFDGEYWKKGDVFLSINSQSMLIL CCEEEEECCCHHHHHHCCCCEEEEECCEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEE YRPLTNQIIWHGKGPFSRVHDVDILDDYRISAFHNNYKFFVNTNVVDGNNEVIIYDFNTN EECCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEEECCCCEEEEEECCCC KYSTYLEESLVENDVRTKTNGRSQILPNGDLFIEETDFGRTLYFDSDGSLRWTHVNRADN CHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEECCCCEEEEECCCCCEEEEEECCCCC GNVYGIGWSRILYTPESIKIVKNFLEARGKCND CCEEEEEEHEEEECCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MFKKIEIWILYLIVFLGIPITIGFGVLVRQELIGSTKLGRVSKTALFLAEIPMNLKKIFL CCEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHEEEEECCCCCHHHHHH SNQLQVAGERFPLLDNFNGTPNSSESYLLLSRYDRDLKEGIVELVDLMNFKVLHTWNPDI CCCEEECCCCCCCCCCCCCCCCCCCCEEEEEHHCCHHHHHHHHHHHHHCEEEEEECCCCH NKFNDSVKQSGEFKYLNRDGNNSRFLLRHPLLLKDGGLVFQDSSPLMKIDECSNLIFQNT HHHHHHHHCCCCEEEEECCCCCCEEEEECCEEEECCCEEEECCCCCEEHHHHHHHHHCCC QDRFHHSIETDIDGNIWVPSYMYPQTLPVEKVGRDIVEENGYIDDGIVKLSPNGEVLFEK HHHHHCCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEC SVSQIFIDNNLESLLFSSGDYRFVKDPIHLNDIQPVDFDGEYWKKGDVFLSINSQSMLIL CCEEEEECCCHHHHHHCCCCEEEEECCEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEE YRPLTNQIIWHGKGPFSRVHDVDILDDYRISAFHNNYKFFVNTNVVDGNNEVIIYDFNTN EECCCCCEEEECCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEEECCCCEEEEEECCCC KYSTYLEESLVENDVRTKTNGRSQILPNGDLFIEETDFGRTLYFDSDGSLRWTHVNRADN CHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEEEECCCCEEEEECCCCCEEEEEECCCCC GNVYGIGWSRILYTPESIKIVKNFLEARGKCND CCEEEEEEHEEEECCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA