| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969233
Identifier: 123969233
GI number: 123969233
Start: 1444580
End: 1446199
Strand: Direct
Name: 123969233
Synonym: A9601_17011
Alternate gene names: NA
Gene position: 1444580-1446199 (Clockwise)
Preceding gene: 123969232
Following gene: 123969236
Centisome position: 86.51
GC content: 33.64
Gene sequence:
>1620_bases ATGAATTTTAATTTGAAGTTCGAAAAATTAAATAAAAAAAATTACCAAAGAAAGCACTATGGAAAAATACTAACTGTAAG ATTGCCGTGTAATCCAATATTTCCAATTGGGCCTATTTATTTAGCAGACCATATTCATAAATGCTTCCCAGATCTAGAGC AGCAATTCATTGATCTAGCAATAATTCCATCAAATAAAGTTTCCAAATATTTAGCCAGAAAAATTGATCAATTTAGACCG CATCTAATCATTTTTTCGTGGAGAGATATACAAATTTATGCACCTGTTGATGGTAGGAGTGGGAACCCTCTACAAAACTC TTTTGAAGTTTTCTACTCAAAAAATATCTTTAAAAAAATTAGAGGTTCCTGGGGAGGATTAAAATTAATTGCATCTCATT ATGGAGAAATATATAGAAATACTTCTTTAGTCAAGATGGGACTAAAAAGATCACAAAAATACAATAAAAATGTCAAAGTA ATTTTAGGAGGTGGAGCTGTTAGTGTCTTCTATGAACAATTGGGAAATTTACTCCCAAAAGGAACTGTTATTTCAGTAGG GGAGGGAGAAAATCTCATTGAAAAAATCATTAGAGGAGATTCAATAGAGGAAGAAAGATGTTACATTGCTGGACAAAAAC CTAGAAATAAATTGATACATGAACAACCTTCGGGGACTGTTAAAACAGCTTGTAATTATAAATATATAAAATCAATATGG CCTGAATTCAATTGGTATATAGAAGGCGGAGATTATTACGTAGGGGTGCAAACAAAAAGAGGTTGCCCTCATAATTGCTG TTTCTGTGTTTATACAGTTGTGGAGGGTAAGCAGGTTCGCGTCAATCCTATTAACGAAGTAATCAAAGAAATGAAGCAAT TATATGATCTTGGAGTAAGAGGATTTTGGTTCACAGATGCACAGTTTATTCCAGCTAAAAAACATATTGAAGATGCAAAA TCACTTTTGCAAGCAATTAAAGATCAAGGCTGGGACGATATTAATTGGGCTGCATACATTAGAGCAGATAATATTGATGC TGAGCTAGCTCAGCTTATGGTTGATACAGGTATGAGCTATTTTGAAATAGGTATCACGTCGGGATCTCAAGAACTTGTTA GAAAAATGAGATTAGCGTATGATCTCGAAACTGTATTAAATAATTGCAGAATGCTTGTCAAATCAGGTTTTAAGAATCAT GTTTCAGTGAATTATTCTTTTAATGTTTTTGATGAAACGCCTAGCACCATAAGACAAACAATTGCTTACCATAGAGAATT AGAAAATATATTTGGTAAAGGCTTAGTTGACCCAGCTATATTTTTTATAGGATTGCAACCTCACACTCTTCTTGAGAAGT ACGCGCTGGAACATAAAATTTTGAAGCCAAATTATAATCCAATGAGCATGATGCCTTGGACAGCGAGAAAACTTCTATGG AATCCAGGCTCATTAGGGGAAAAACTTGGGGAGATTTGCTTAGAAGCTTTTGATAATCCAGAAGATGAATTCGGTAAAAC AGTTATCGACATTCTTGAGAGAGAATATGGAAAGTCCTCCTTAAAAGAATCCTTAAAAGTCCGTCCATTATCTGAAAGGA AATTAGCTCATTCTAAATAA
Upstream 100 bases:
>100_bases TAAAATTATCCCGAGTATTTTCTTAGTATTTTCAATTTCTCCAAATTAGTAATAAAGTAGTTAGATTCTTAAAAGAAATA GATTCATTAAATTTCATGAC
Downstream 100 bases:
>100_bases TAAATCCAACCACTATTAATCCTCTTTCTCAATTGAACTAGAAATTCCTTTAGATTTCAATGATTCTGAGTAGAATTCTG CTGGCTCTAAATCACAAACT
Product: Fe-S oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 539; Mature: 539
Protein sequence:
>539_residues MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLAIIPSNKVSKYLARKIDQFRP HLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNIFKKIRGSWGGLKLIASHYGEIYRNTSLVKMGLKRSQKYNKNVKV ILGGGAVSVFYEQLGNLLPKGTVISVGEGENLIEKIIRGDSIEEERCYIAGQKPRNKLIHEQPSGTVKTACNYKYIKSIW PEFNWYIEGGDYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPINEVIKEMKQLYDLGVRGFWFTDAQFIPAKKHIEDAK SLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSYFEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNH VSVNYSFNVFDETPSTIRQTIAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW NPGSLGEKLGEICLEAFDNPEDEFGKTVIDILEREYGKSSLKESLKVRPLSERKLAHSK
Sequences:
>Translated_539_residues MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLAIIPSNKVSKYLARKIDQFRP HLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNIFKKIRGSWGGLKLIASHYGEIYRNTSLVKMGLKRSQKYNKNVKV ILGGGAVSVFYEQLGNLLPKGTVISVGEGENLIEKIIRGDSIEEERCYIAGQKPRNKLIHEQPSGTVKTACNYKYIKSIW PEFNWYIEGGDYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPINEVIKEMKQLYDLGVRGFWFTDAQFIPAKKHIEDAK SLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSYFEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNH VSVNYSFNVFDETPSTIRQTIAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW NPGSLGEKLGEICLEAFDNPEDEFGKTVIDILEREYGKSSLKESLKVRPLSERKLAHSK >Mature_539_residues MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLAIIPSNKVSKYLARKIDQFRP HLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNIFKKIRGSWGGLKLIASHYGEIYRNTSLVKMGLKRSQKYNKNVKV ILGGGAVSVFYEQLGNLLPKGTVISVGEGENLIEKIIRGDSIEEERCYIAGQKPRNKLIHEQPSGTVKTACNYKYIKSIW PEFNWYIEGGDYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPINEVIKEMKQLYDLGVRGFWFTDAQFIPAKKHIEDAK SLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSYFEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNH VSVNYSFNVFDETPSTIRQTIAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW NPGSLGEKLGEICLEAFDNPEDEFGKTVIDILEREYGKSSLKESLKVRPLSERKLAHSK
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006158 - InterPro: IPR006638 - InterPro: IPR005839 - InterPro: IPR007197 [H]
Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 61950; Mature: 61950
Theoretical pI: Translated: 9.33; Mature: 9.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLA CCCCCCHHHCCCHHCCHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEE IIPSNKVSKYLARKIDQFRPHLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNIFKKI EECCHHHHHHHHHHHHHCCCCEEEEEECEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH RGSWGGLKLIASHYGEIYRNTSLVKMGLKRSQKYNKNVKVILGGGAVSVFYEQLGNLLPK CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCC GTVISVGEGENLIEKIIRGDSIEEERCYIAGQKPRNKLIHEQPSGTVKTACNYKYIKSIW CCEEEECCCHHHHHHHHCCCCCCCCCEEECCCCCHHCCCCCCCCCCEEHHCCHHHHHHHC PEFNWYIEGGDYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPINEVIKEMKQLYDLGVR CCCEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHCCCC GFWFTDAQFIPAKKHIEDAKSLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSY EEEECCCEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCE FEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNHVSVNYSFNVFDETPSTIRQT EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHH IAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHC NPGSLGEKLGEICLEAFDNPEDEFGKTVIDILEREYGKSSLKESLKVRPLSERKLAHSK CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCC >Mature Secondary Structure MNFNLKFEKLNKKNYQRKHYGKILTVRLPCNPIFPIGPIYLADHIHKCFPDLEQQFIDLA CCCCCCHHHCCCHHCCHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEE IIPSNKVSKYLARKIDQFRPHLIIFSWRDIQIYAPVDGRSGNPLQNSFEVFYSKNIFKKI EECCHHHHHHHHHHHHHCCCCEEEEEECEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH RGSWGGLKLIASHYGEIYRNTSLVKMGLKRSQKYNKNVKVILGGGAVSVFYEQLGNLLPK CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCC GTVISVGEGENLIEKIIRGDSIEEERCYIAGQKPRNKLIHEQPSGTVKTACNYKYIKSIW CCEEEECCCHHHHHHHHCCCCCCCCCEEECCCCCHHCCCCCCCCCCEEHHCCHHHHHHHC PEFNWYIEGGDYYVGVQTKRGCPHNCCFCVYTVVEGKQVRVNPINEVIKEMKQLYDLGVR CCCEEEEECCCEEEEEEECCCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHCCCC GFWFTDAQFIPAKKHIEDAKSLLQAIKDQGWDDINWAAYIRADNIDAELAQLMVDTGMSY EEEECCCEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCE FEIGITSGSQELVRKMRLAYDLETVLNNCRMLVKSGFKNHVSVNYSFNVFDETPSTIRQT EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCHHHHHHH IAYHRELENIFGKGLVDPAIFFIGLQPHTLLEKYALEHKILKPNYNPMSMMPWTARKLLW HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHC NPGSLGEKLGEICLEAFDNPEDEFGKTVIDILEREYGKSSLKESLKVRPLSERKLAHSK CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]