Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123969130

Identifier: 123969130

GI number: 123969130

Start: 1359074

End: 1359280

Strand: Reverse

Name: 123969130

Synonym: A9601_15981

Alternate gene names: NA

Gene position: 1359280-1359074 (Counterclockwise)

Preceding gene: 123969131

Following gene: 123969126

Centisome position: 81.4

GC content: 38.16

Gene sequence:

>207_bases
ATGACGAAGTCTGGAGTTACTACAGAATCAGGTGGAAGACAAAATATGTTTCCATCAGAAACTAGGCCTTATATTGATGA
ATCTGTATCTTATGATGGGTATCCTCAAAATGCTGAAAAAGTAAATGGCAGATGGGCTATGGTAGGTTTCGTTGCACTAT
TAGGTGCATACATAACAACAGGCCAGATAATTCCAGGAATTTTCTAG

Upstream 100 bases:

>100_bases
AATATTGACTCGTAATTGCTTGGGGATTCAATGATTGAAGTCTTTTAGTTTACATAAGTTAATATTTATGTTACTTTAGT
TAACAATTATTATATTTTAA

Downstream 100 bases:

>100_bases
TTCCTCGATTTCTGTTTTTATAAGCTATTTTTAAAAAATTTAAAAGAATTTAAATAAATTTAGAATTAATTTTTATTCAA
TTAACCTCATTCTTTTAGCA

Product: high light inducible protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MTKSGVTTESGGRQNMFPSETRPYIDESVSYDGYPQNAEKVNGRWAMVGFVALLGAYITTGQIIPGIF

Sequences:

>Translated_68_residues
MTKSGVTTESGGRQNMFPSETRPYIDESVSYDGYPQNAEKVNGRWAMVGFVALLGAYITTGQIIPGIF
>Mature_67_residues
TKSGVTTESGGRQNMFPSETRPYIDESVSYDGYPQNAEKVNGRWAMVGFVALLGAYITTGQIIPGIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7406; Mature: 7275

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSGVTTESGGRQNMFPSETRPYIDESVSYDGYPQNAEKVNGRWAMVGFVALLGAYITT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GQIIPGIF
CCCCCCCC
>Mature Secondary Structure 
TKSGVTTESGGRQNMFPSETRPYIDESVSYDGYPQNAEKVNGRWAMVGFVALLGAYITT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC
GQIIPGIF
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA