Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123969126

Identifier: 123969126

GI number: 123969126

Start: 1356970

End: 1357593

Strand: Reverse

Name: 123969126

Synonym: A9601_15941

Alternate gene names: NA

Gene position: 1357593-1356970 (Counterclockwise)

Preceding gene: 123969130

Following gene: 123969123

Centisome position: 81.3

GC content: 32.69

Gene sequence:

>624_bases
TTGGATAATAGACTGTTTTATTCGTCAACTCAAAGAAATAGAGACTGCATTGGTGATGTACTCTCCAGAATTATAAAAAA
AGGTTCAGTATTGGAAATCGGGAGTGGCAGCGGTGAACATGGAGTGGTTTTTCAAAAACGCTTTCCTGGAATAATTTGGC
AAACAAGTGACCCAGAGTTAGTGCATAGAAAAAGTATAAGTTCTTGGATTGAGTATGAAGACCTAACTAAGAATATGCCC
CAGCCTCTTGAGATTGATGTAGAAAAAATTCCTTGGAAAATTCCATTGAGATTAGCTCATTCTTTGCAAGGAATAGTCTC
TATAAATATGATTCATGTTGCACAGTGGTCTTGTACTGTAGCACTCTTTAGAGAGTCAGGAAAATTACTCAATAAGGGGC
AATTTTTGATTTTGTATGGGCCATTTAAAATTTGTAATAAGCATACAAGTGAAAGTAATTATTTTTTCGATAATTCTTTA
AAAATGCAAAATGGTCTATGGGGTATTAAAAATCTTGAGGAAGTTTGTGATGAGAGTAAGAAAAATGGTTTTTCTCAAGA
GGATATTATTAAAATGCCTGCAAATAATTTTTCGATAATTTACAGAAAAATTTTTGATAAATGA

Upstream 100 bases:

>100_bases
GTCTTAAAATAATGTTTTTCAAGACTCCTAAATTAAGAAAGGTTAAATAATCAACGATTTTAGAAATATTCTTTTTATCG
AAGCGCCCATTTTTTTAATT

Downstream 100 bases:

>100_bases
AATGTAAATATTAATAAGTTTTGCGAATGCAGCATATTAGATGATCAACCTGATAGTTTTTTGCTCCATTCTTTATGCTT
TTGATCTAAATCTGAAATTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MDNRLFYSSTQRNRDCIGDVLSRIIKKGSVLEIGSGSGEHGVVFQKRFPGIIWQTSDPELVHRKSISSWIEYEDLTKNMP
QPLEIDVEKIPWKIPLRLAHSLQGIVSINMIHVAQWSCTVALFRESGKLLNKGQFLILYGPFKICNKHTSESNYFFDNSL
KMQNGLWGIKNLEEVCDESKKNGFSQEDIIKMPANNFSIIYRKIFDK

Sequences:

>Translated_207_residues
MDNRLFYSSTQRNRDCIGDVLSRIIKKGSVLEIGSGSGEHGVVFQKRFPGIIWQTSDPELVHRKSISSWIEYEDLTKNMP
QPLEIDVEKIPWKIPLRLAHSLQGIVSINMIHVAQWSCTVALFRESGKLLNKGQFLILYGPFKICNKHTSESNYFFDNSL
KMQNGLWGIKNLEEVCDESKKNGFSQEDIIKMPANNFSIIYRKIFDK
>Mature_207_residues
MDNRLFYSSTQRNRDCIGDVLSRIIKKGSVLEIGSGSGEHGVVFQKRFPGIIWQTSDPELVHRKSISSWIEYEDLTKNMP
QPLEIDVEKIPWKIPLRLAHSLQGIVSINMIHVAQWSCTVALFRESGKLLNKGQFLILYGPFKICNKHTSESNYFFDNSL
KMQNGLWGIKNLEEVCDESKKNGFSQEDIIKMPANNFSIIYRKIFDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI93102387, Length=203, Percent_Identity=36.4532019704434, Blast_Score=121, Evalue=4e-28,
Organism=Homo sapiens, GI93102391, Length=146, Percent_Identity=36.3013698630137, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71998087, Length=202, Percent_Identity=28.2178217821782, Blast_Score=85, Evalue=2e-17,
Organism=Drosophila melanogaster, GI28574095, Length=204, Percent_Identity=30.8823529411765, Blast_Score=114, Evalue=5e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23829; Mature: 23829

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNRLFYSSTQRNRDCIGDVLSRIIKKGSVLEIGSGSGEHGVVFQKRFPGIIWQTSDPEL
CCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCHH
VHRKSISSWIEYEDLTKNMPQPLEIDVEKIPWKIPLRLAHSLQGIVSINMIHVAQWSCTV
HHHHHHHHHHHHHHHHCCCCCCCEECHHHCCEECHHHHHHHHHHHEEEEEEEEEHHHHHE
ALFRESGKLLNKGQFLILYGPFKICNKHTSESNYFFDNSLKMQNGLWGIKNLEEVCDESK
EEEHHCCCEECCCCEEEEECCHHHHCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHH
KNGFSQEDIIKMPANNFSIIYRKIFDK
HCCCCCCCEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure
MDNRLFYSSTQRNRDCIGDVLSRIIKKGSVLEIGSGSGEHGVVFQKRFPGIIWQTSDPEL
CCCCEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEECCCCEEEECCCCHH
VHRKSISSWIEYEDLTKNMPQPLEIDVEKIPWKIPLRLAHSLQGIVSINMIHVAQWSCTV
HHHHHHHHHHHHHHHHCCCCCCCEECHHHCCEECHHHHHHHHHHHEEEEEEEEEHHHHHE
ALFRESGKLLNKGQFLILYGPFKICNKHTSESNYFFDNSLKMQNGLWGIKNLEEVCDESK
EEEHHCCCEECCCCEEEEECCHHHHCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHHHH
KNGFSQEDIIKMPANNFSIIYRKIFDK
HCCCCCCCEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA