| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968990
Identifier: 123968990
GI number: 123968990
Start: 1242253
End: 1243089
Strand: Direct
Name: 123968990
Synonym: A9601_14581
Alternate gene names: NA
Gene position: 1242253-1243089 (Clockwise)
Preceding gene: 123968989
Following gene: 123968991
Centisome position: 74.39
GC content: 25.93
Gene sequence:
>837_bases ATGAAAGTTTTATTAACAGGATCAAATGGTTTCTTAGGTGGTAATTTAAAAGATTTTTATATTAAAAAACCATACTTATT ACATTTTTATAATAGGCAAAAGTCCTATTATGAAATTCTAAAAGGTAATGAAGAATTTGATTTAATTATAAATACGGCTT CTGCAACTCCAAAGAACTGTGATAATAAATTAATCCTAGAGTCAAACATTGTTAATACATCAAAATTATGCAATATAGCT TTGAAATGCAAAGTAAAGTATTTCATAAATATATCTTCAGTAAGTGTCTATGGGAAACCCAATACAAGTCAGCTTACAGA AGATAGTCCATTGGATGCAAAAGATAATTATGGATATTCAAAATTATTATCAGAAGAAATTATCGATAGTAATCTCAAAG CATTTATGAGAGTTTATCATTTTAGAGCTCCAGGAATAATTGGGAAGGGATCATTCCAAGCTTCAGGAAATTTTATTTCA ACATTAATTCATAAATTAAAAAAAAATATTCCCATAGAAATACATTCACCTAAATCAAAGTTTAATAACATTACATCTGA TTATTCAATTTACAGGTGTATAAATCATGTCCTACAAAATAATATAGAATCTGGGGCTTTTTTAATCGCATCAAATCAAT CTTTGCTTCTAGAAGAATTAGTAGATTTTGTCAAACAAAAAACAAAATCTTTATCTTCTATCAAGTGGATTGAAGAACCT TTAAATCATCAACCTTTTATTATAGATAATGCAAAATGTAATAAATTTAAATTCCCAATACGAAAAACACGTGAAGAATT AGAATATTACATAAAAGAGATAAGAGATTATGAATAA
Upstream 100 bases:
>100_bases AAGATAGTTTTAAAATTTTAATGAAAGCGTTTGATTATCTTAAAAACAGTGAAGAAATTATTCAAATTATTAAAGATTTT TAACCTGAAATTATTTTAAA
Downstream 100 bases:
>100_bases AAAAGCATTAATTATAGGTGGCGGGTTTGCAGGCTGCTCAGCTGCTCATCAACTAGAACTAATAGGGAACTGGGATGTCA CTTTAATAGAAAAAGCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MKVLLTGSNGFLGGNLKDFYIKKPYLLHFYNRQKSYYEILKGNEEFDLIINTASATPKNCDNKLILESNIVNTSKLCNIA LKCKVKYFINISSVSVYGKPNTSQLTEDSPLDAKDNYGYSKLLSEEIIDSNLKAFMRVYHFRAPGIIGKGSFQASGNFIS TLIHKLKKNIPIEIHSPKSKFNNITSDYSIYRCINHVLQNNIESGAFLIASNQSLLLEELVDFVKQKTKSLSSIKWIEEP LNHQPFIIDNAKCNKFKFPIRKTREELEYYIKEIRDYE
Sequences:
>Translated_278_residues MKVLLTGSNGFLGGNLKDFYIKKPYLLHFYNRQKSYYEILKGNEEFDLIINTASATPKNCDNKLILESNIVNTSKLCNIA LKCKVKYFINISSVSVYGKPNTSQLTEDSPLDAKDNYGYSKLLSEEIIDSNLKAFMRVYHFRAPGIIGKGSFQASGNFIS TLIHKLKKNIPIEIHSPKSKFNNITSDYSIYRCINHVLQNNIESGAFLIASNQSLLLEELVDFVKQKTKSLSSIKWIEEP LNHQPFIIDNAKCNKFKFPIRKTREELEYYIKEIRDYE >Mature_278_residues MKVLLTGSNGFLGGNLKDFYIKKPYLLHFYNRQKSYYEILKGNEEFDLIINTASATPKNCDNKLILESNIVNTSKLCNIA LKCKVKYFINISSVSVYGKPNTSQLTEDSPLDAKDNYGYSKLLSEEIIDSNLKAFMRVYHFRAPGIIGKGSFQASGNFIS TLIHKLKKNIPIEIHSPKSKFNNITSDYSIYRCINHVLQNNIESGAFLIASNQSLLLEELVDFVKQKTKSLSSIKWIEEP LNHQPFIIDNAKCNKFKFPIRKTREELEYYIKEIRDYE
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31964; Mature: 31964
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLLTGSNGFLGGNLKDFYIKKPYLLHFYNRQKSYYEILKGNEEFDLIINTASATPKNC CEEEEECCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHCCCCCEEEEEEECCCCCCCC DNKLILESNIVNTSKLCNIALKCKVKYFINISSVSVYGKPNTSQLTEDSPLDAKDNYGYS CCEEEEECCCCCHHHHHEEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHH KLLSEEIIDSNLKAFMRVYHFRAPGIIGKGSFQASGNFISTLIHKLKKNIPIEIHSPKSK HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCEEEECCHHH FNNITSDYSIYRCINHVLQNNIESGAFLIASNQSLLLEELVDFVKQKTKSLSSIKWIEEP HCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LNHQPFIIDNAKCNKFKFPIRKTREELEYYIKEIRDYE CCCCCEEEECCCCCCEECCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKVLLTGSNGFLGGNLKDFYIKKPYLLHFYNRQKSYYEILKGNEEFDLIINTASATPKNC CEEEEECCCCCCCCCCCEEEECCCCEEEEECCCHHHHHHHCCCCCEEEEEEECCCCCCCC DNKLILESNIVNTSKLCNIALKCKVKYFINISSVSVYGKPNTSQLTEDSPLDAKDNYGYS CCEEEEECCCCCHHHHHEEEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHH KLLSEEIIDSNLKAFMRVYHFRAPGIIGKGSFQASGNFISTLIHKLKKNIPIEIHSPKSK HHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCEEEECCHHH FNNITSDYSIYRCINHVLQNNIESGAFLIASNQSLLLEELVDFVKQKTKSLSSIKWIEEP HCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LNHQPFIIDNAKCNKFKFPIRKTREELEYYIKEIRDYE CCCCCEEEECCCCCCEECCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA