| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968989
Identifier: 123968989
GI number: 123968989
Start: 1241264
End: 1242235
Strand: Direct
Name: 123968989
Synonym: A9601_14571
Alternate gene names: NA
Gene position: 1241264-1242235 (Clockwise)
Preceding gene: 123968988
Following gene: 123968990
Centisome position: 74.33
GC content: 22.12
Gene sequence:
>972_bases ATGTCTAATATCGATTTAATTATCAAAAAACATTTAGAAGATACAGGAGAAAAAATAACCCTTATCAAGGAAATTCATAA ATCTTTAAATGGAAGGCTTTATAAAATAAAATATAAAAATAAAATTTCCATTCTTAAACTTTATAAATCAGAAGATAAAA TTAGATACCATAGAGAAAAAGAAAGTCTTTATATTTTAAATAAAAACCATTTCGAATTCTGTCCTAAATTATTTTACTTT AATAATTTTTACAAGTATTTGATTATTGAAGAACTGAAAGCAAATAAACCAATCCCAAATAATAAATTTAAGTTTGATCT AGCAAAATATATAGAAAATCAGCAAAATTATATTCTTCCTATTGATAAGAATAAAATGATGAATGCTTCTGAAGCTGGTT TTAGTATATTTGAACATCTAGGAATAGTTAAAAAAAAAGCAAATTTTATTTTAGAAAAACTAACTTCACAAGCTCAAACA AAAGAAGCTTGTAAATTTATATCACATGAAATTTTCCCATGGCTGAATTCATATGAAGAACAACTAAGATTAAATGATAA TTACTTTAATAAAATTAAAATTTCAGAAATAATTTTTTCTCAATCAGATATAGGAGTACACAATTCATTTATAAATAATC AAAAGATTTATACATTTGATTATGAATATGCTGGTTTAGATGATCCCGCAAAAACAATTTGCGACCTATTGATTAATCCT GATCAGATTATTAACAAAGATGATTTCAATATAGTGTTAGAAAAAATTTCAACTCTTAAAATATTCAAAAATGCAATTGA TAGATTTAGGATAATCTTACCTATCTATAGATTAAAATGGTTTCTTATAATTTTAAATGGTTATTTAAAAGAAGATAAAC AAGGATCTGAAGATAGTTTTAAAATTTTAATGAAAGCGTTTGATTATCTTAAAAACAGTGAAGAAATTATTCAAATTATT AAAGATTTTTAA
Upstream 100 bases:
>100_bases GAATTAAAGGAATCTTGTATGATCCTTTTAACAAATATGAAAATTACAATTTAGATAAAATTTCTAATTGGACATATATT TATGATTGTTTTAAGTAACT
Downstream 100 bases:
>100_bases CCTGAAATTATTTTAAAATGAAAGTTTTATTAACAGGATCAAATGGTTTCTTAGGTGGTAATTTAAAAGATTTTTATATT AAAAAACCATACTTATTACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSNIDLIIKKHLEDTGEKITLIKEIHKSLNGRLYKIKYKNKISILKLYKSEDKIRYHREKESLYILNKNHFEFCPKLFYF NNFYKYLIIEELKANKPIPNNKFKFDLAKYIENQQNYILPIDKNKMMNASEAGFSIFEHLGIVKKKANFILEKLTSQAQT KEACKFISHEIFPWLNSYEEQLRLNDNYFNKIKISEIIFSQSDIGVHNSFINNQKIYTFDYEYAGLDDPAKTICDLLINP DQIINKDDFNIVLEKISTLKIFKNAIDRFRIILPIYRLKWFLIILNGYLKEDKQGSEDSFKILMKAFDYLKNSEEIIQII KDF
Sequences:
>Translated_323_residues MSNIDLIIKKHLEDTGEKITLIKEIHKSLNGRLYKIKYKNKISILKLYKSEDKIRYHREKESLYILNKNHFEFCPKLFYF NNFYKYLIIEELKANKPIPNNKFKFDLAKYIENQQNYILPIDKNKMMNASEAGFSIFEHLGIVKKKANFILEKLTSQAQT KEACKFISHEIFPWLNSYEEQLRLNDNYFNKIKISEIIFSQSDIGVHNSFINNQKIYTFDYEYAGLDDPAKTICDLLINP DQIINKDDFNIVLEKISTLKIFKNAIDRFRIILPIYRLKWFLIILNGYLKEDKQGSEDSFKILMKAFDYLKNSEEIIQII KDF >Mature_322_residues SNIDLIIKKHLEDTGEKITLIKEIHKSLNGRLYKIKYKNKISILKLYKSEDKIRYHREKESLYILNKNHFEFCPKLFYFN NFYKYLIIEELKANKPIPNNKFKFDLAKYIENQQNYILPIDKNKMMNASEAGFSIFEHLGIVKKKANFILEKLTSQAQTK EACKFISHEIFPWLNSYEEQLRLNDNYFNKIKISEIIFSQSDIGVHNSFINNQKIYTFDYEYAGLDDPAKTICDLLINPD QIINKDDFNIVLEKISTLKIFKNAIDRFRIILPIYRLKWFLIILNGYLKEDKQGSEDSFKILMKAFDYLKNSEEIIQIIK DF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38529; Mature: 38398
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIDLIIKKHLEDTGEKITLIKEIHKSLNGRLYKIKYKNKISILKLYKSEDKIRYHREK CCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCHHHHHHCC ESLYILNKNHFEFCPKLFYFNNFYKYLIIEELKANKPIPNNKFKFDLAKYIENQQNYILP CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEE IDKNKMMNASEAGFSIFEHLGIVKKKANFILEKLTSQAQTKEACKFISHEIFPWLNSYEE ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLRLNDNYFNKIKISEIIFSQSDIGVHNSFINNQKIYTFDYEYAGLDDPAKTICDLLINP HHCCCCCCCCEEEHHHHHCCCCCCCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCC DQIINKDDFNIVLEKISTLKIFKNAIDRFRIILPIYRLKWFLIILNGYLKEDKQGSEDSF HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH KILMKAFDYLKNSEEIIQIIKDF HHHHHHHHHHCCHHHHHHHHHCC >Mature Secondary Structure SNIDLIIKKHLEDTGEKITLIKEIHKSLNGRLYKIKYKNKISILKLYKSEDKIRYHREK CCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCEEEEEEECCCCHHHHHHCC ESLYILNKNHFEFCPKLFYFNNFYKYLIIEELKANKPIPNNKFKFDLAKYIENQQNYILP CCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEE IDKNKMMNASEAGFSIFEHLGIVKKKANFILEKLTSQAQTKEACKFISHEIFPWLNSYEE ECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLRLNDNYFNKIKISEIIFSQSDIGVHNSFINNQKIYTFDYEYAGLDDPAKTICDLLINP HHCCCCCCCCEEEHHHHHCCCCCCCCHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHCCC DQIINKDDFNIVLEKISTLKIFKNAIDRFRIILPIYRLKWFLIILNGYLKEDKQGSEDSF HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH KILMKAFDYLKNSEEIIQIIKDF HHHHHHHHHHCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA