| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968988
Identifier: 123968988
GI number: 123968988
Start: 1240665
End: 1241261
Strand: Direct
Name: 123968988
Synonym: A9601_14561
Alternate gene names: NA
Gene position: 1240665-1241261 (Clockwise)
Preceding gene: 123968987
Following gene: 123968989
Centisome position: 74.3
GC content: 26.13
Gene sequence:
>597_bases ATGAGAGTAGGATTTGATTTTGATAACACCTTAATAAACTATTATGGAGTTTTTTATGAAATAGCCCTTAGCAAGGGTTT AATCCCGCCATCAATTAGTAAAGATAAAAATAGTGTAAAGGAATATTTGAAAAAAAATAATAAAGAGGATGCTTTTACCG AAATACAAGGCTTAGTTTATGGTAGAGAAATTTATAAGTCAAAGCCTACAAAACATTTATTAACTGGTTTAAGTGAATTA TTAAAGTTTGCAAAAAATGAAGATCTCTTTATAGTAAGTCATAAAACAAAATATCCTTATATTGGAGAAAGAATAAACCT AAGGGAAGCTGCTGAAAAGTGGATCGAAGAATTCTTAAAGATTAATAAAAGAAAAATTTTCCCAAAAAATAATATTTTTT TTGAGGCCACAATAGAAGAAAAAATCGCAAGAATTAATTCTCTAAAATGTGACTATTACTTTGATGATTTACCTCTTATT ATCGAAAAATTGCCTTCGCGAATTAAAGGAATCTTGTATGATCCTTTTAACAAATATGAAAATTACAATTTAGATAAAAT TTCTAATTGGACATATATTTATGATTGTTTTAAGTAA
Upstream 100 bases:
>100_bases CTCCAGATAAATTTATTCATAATCTTGGGAATCAAAAATATATAAGAAAAGAAATTGGACTTGACTCTAATTCAATCTTG CAAGAAATAATATTTTAATA
Downstream 100 bases:
>100_bases CTATGTCTAATATCGATTTAATTATCAAAAAACATTTAGAAGATACAGGAGAAAAAATAACCCTTATCAAGGAAATTCAT AAATCTTTAAATGGAAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MRVGFDFDNTLINYYGVFYEIALSKGLIPPSISKDKNSVKEYLKKNNKEDAFTEIQGLVYGREIYKSKPTKHLLTGLSEL LKFAKNEDLFIVSHKTKYPYIGERINLREAAEKWIEEFLKINKRKIFPKNNIFFEATIEEKIARINSLKCDYYFDDLPLI IEKLPSRIKGILYDPFNKYENYNLDKISNWTYIYDCFK
Sequences:
>Translated_198_residues MRVGFDFDNTLINYYGVFYEIALSKGLIPPSISKDKNSVKEYLKKNNKEDAFTEIQGLVYGREIYKSKPTKHLLTGLSEL LKFAKNEDLFIVSHKTKYPYIGERINLREAAEKWIEEFLKINKRKIFPKNNIFFEATIEEKIARINSLKCDYYFDDLPLI IEKLPSRIKGILYDPFNKYENYNLDKISNWTYIYDCFK >Mature_198_residues MRVGFDFDNTLINYYGVFYEIALSKGLIPPSISKDKNSVKEYLKKNNKEDAFTEIQGLVYGREIYKSKPTKHLLTGLSEL LKFAKNEDLFIVSHKTKYPYIGERINLREAAEKWIEEFLKINKRKIFPKNNIFFEATIEEKIARINSLKCDYYFDDLPLI IEKLPSRIKGILYDPFNKYENYNLDKISNWTYIYDCFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23534; Mature: 23534
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVGFDFDNTLINYYGVFYEIALSKGLIPPSISKDKNSVKEYLKKNNKEDAFTEIQGLVY CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH GREIYKSKPTKHLLTGLSELLKFAKNEDLFIVSHKTKYPYIGERINLREAAEKWIEEFLK HHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH INKRKIFPKNNIFFEATIEEKIARINSLKCDYYFDDLPLIIEKLPSRIKGILYDPFNKYE HCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHEECCCHHHHC NYNLDKISNWTYIYDCFK CCCCCHHCCCEEEEEECC >Mature Secondary Structure MRVGFDFDNTLINYYGVFYEIALSKGLIPPSISKDKNSVKEYLKKNNKEDAFTEIQGLVY CCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHH GREIYKSKPTKHLLTGLSELLKFAKNEDLFIVSHKTKYPYIGERINLREAAEKWIEEFLK HHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHH INKRKIFPKNNIFFEATIEEKIARINSLKCDYYFDDLPLIIEKLPSRIKGILYDPFNKYE HCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHEECCCHHHHC NYNLDKISNWTYIYDCFK CCCCCHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA