| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968953
Identifier: 123968953
GI number: 123968953
Start: 1193164
End: 1194087
Strand: Direct
Name: 123968953
Synonym: A9601_14201
Alternate gene names: NA
Gene position: 1193164-1194087 (Clockwise)
Preceding gene: 123968952
Following gene: 123968954
Centisome position: 71.45
GC content: 28.79
Gene sequence:
>924_bases TTGTCATTTTACCTTAAGAAAAAAATTAGAAATAATTATAAAATCGAAATAATATCTAGGGCATATCACGCTGGTGTAAT TGCCTCAGTTATAAAGTCTAAAGTAAAAAAAATAAATCATAATTTTGACCCAAGAAGTTTATATCCAGAAGAAAGCGTGA CAGTTCAAAAATGGTCTTTTGGTGGAAAGATATATCAAAACTGGAAAAAACAGGAGAAGTTTATATTACATTTTACTGAT AAAGTTTCAGTTGTTACTCCAGAGATGTATCAATGGTTCAAATCCGAGGGGTTCAAGGGAGAAATTTCATTAAAACATTT CAATATTGATGAGAAGATTTTTAATCTTGAAATCTCTGAGCCAGGTTTATCAAACTTTTATAGAGAAAAATTTAATATAA GACCTGATACAATAGTCTTTGGATTTTTAGGAAGTCTTGGGTCTTCAAGACAATGGAATTCTATTTATCCATATATTAAA CATCTAAACAGTCTTTACCAATTAGTTGGCAAAAATATAGAATTTTGCTTTGCGATAAAGAGTTCATGGCTCAATAAAAT ACAAAAAACTGAACTAACTAATTCCTTAAAATGCAAAGTTATATTTTTAGAGGATTTGTCAATCGAAGAAAGTTTATCAT TCTTTAATTTAGGCTGCCATATTATGCTTGATGGTCCTGATAATATTACAAGGGTTGGAATAAAAGTTTATGAATACTTG GCAGCAGGTCTACCAATATTAACAAACAGTTCTGCAGGTGCAGCATGTAATTTGAGCAAAAAGATGGGTGGATTTATTGA TATTATGAGCATATATGAATTAGATAATCATATTGTTGACGATTTAAAAAGAATGACAAAAACAAACCATAGAATTTTGA TAAGGAAAAACTTCTTGAAATATCTTAAAGAATTCAAAATATGA
Upstream 100 bases:
>100_bases CATAGATATTAATCTAATATGTCTACCAATTGCTTTACCAAGCCGATATTTAGAAAAGACGAAATTGTTTTCAATTTATT TGAAATTAATAGGAAGATTT
Downstream 100 bases:
>100_bases GAAAAGATTCCTATCAAACAATAATAAATTATTTACCAGCATCGGAAGATTTTAGCCATCCTTCTGATAGGAGAGGGGTC AAAATGTTTTGCTCTAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSFYLKKKIRNNYKIEIISRAYHAGVIASVIKSKVKKINHNFDPRSLYPEESVTVQKWSFGGKIYQNWKKQEKFILHFTD KVSVVTPEMYQWFKSEGFKGEISLKHFNIDEKIFNLEISEPGLSNFYREKFNIRPDTIVFGFLGSLGSSRQWNSIYPYIK HLNSLYQLVGKNIEFCFAIKSSWLNKIQKTELTNSLKCKVIFLEDLSIEESLSFFNLGCHIMLDGPDNITRVGIKVYEYL AAGLPILTNSSAGAACNLSKKMGGFIDIMSIYELDNHIVDDLKRMTKTNHRILIRKNFLKYLKEFKI
Sequences:
>Translated_307_residues MSFYLKKKIRNNYKIEIISRAYHAGVIASVIKSKVKKINHNFDPRSLYPEESVTVQKWSFGGKIYQNWKKQEKFILHFTD KVSVVTPEMYQWFKSEGFKGEISLKHFNIDEKIFNLEISEPGLSNFYREKFNIRPDTIVFGFLGSLGSSRQWNSIYPYIK HLNSLYQLVGKNIEFCFAIKSSWLNKIQKTELTNSLKCKVIFLEDLSIEESLSFFNLGCHIMLDGPDNITRVGIKVYEYL AAGLPILTNSSAGAACNLSKKMGGFIDIMSIYELDNHIVDDLKRMTKTNHRILIRKNFLKYLKEFKI >Mature_306_residues SFYLKKKIRNNYKIEIISRAYHAGVIASVIKSKVKKINHNFDPRSLYPEESVTVQKWSFGGKIYQNWKKQEKFILHFTDK VSVVTPEMYQWFKSEGFKGEISLKHFNIDEKIFNLEISEPGLSNFYREKFNIRPDTIVFGFLGSLGSSRQWNSIYPYIKH LNSLYQLVGKNIEFCFAIKSSWLNKIQKTELTNSLKCKVIFLEDLSIEESLSFFNLGCHIMLDGPDNITRVGIKVYEYLA AGLPILTNSSAGAACNLSKKMGGFIDIMSIYELDNHIVDDLKRMTKTNHRILIRKNFLKYLKEFKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35721; Mature: 35590
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFYLKKKIRNNYKIEIISRAYHAGVIASVIKSKVKKINHNFDPRSLYPEESVTVQKWSF CCCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECC GGKIYQNWKKQEKFILHFTDKVSVVTPEMYQWFKSEGFKGEISLKHFNIDEKIFNLEISE CCHHHHHHHHCCEEEEEEECCEEEECHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECC PGLSNFYREKFNIRPDTIVFGFLGSLGSSRQWNSIYPYIKHLNSLYQLVGKNIEFCFAIK CCHHHHHHHHCCCCCCHHHHEEHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEH SSWLNKIQKTELTNSLKCKVIFLEDLSIEESLSFFNLGCHIMLDGPDNITRVGIKVYEYL HHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHEEECCEEEEEECCCCHHHHHHHHHHHH AAGLPILTNSSAGAACNLSKKMGGFIDIMSIYELDNHIVDDLKRMTKTNHRILIRKNFLK HCCCCEEECCCCCCEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH YLKEFKI HHHHHCC >Mature Secondary Structure SFYLKKKIRNNYKIEIISRAYHAGVIASVIKSKVKKINHNFDPRSLYPEESVTVQKWSF CCCHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECC GGKIYQNWKKQEKFILHFTDKVSVVTPEMYQWFKSEGFKGEISLKHFNIDEKIFNLEISE CCHHHHHHHHCCEEEEEEECCEEEECHHHHHHHHCCCCCCEEEEEEECCCCEEEEEEECC PGLSNFYREKFNIRPDTIVFGFLGSLGSSRQWNSIYPYIKHLNSLYQLVGKNIEFCFAIK CCHHHHHHHHCCCCCCHHHHEEHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEH SSWLNKIQKTELTNSLKCKVIFLEDLSIEESLSFFNLGCHIMLDGPDNITRVGIKVYEYL HHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHEEECCEEEEEECCCCHHHHHHHHHHHH AAGLPILTNSSAGAACNLSKKMGGFIDIMSIYELDNHIVDDLKRMTKTNHRILIRKNFLK HCCCCEEECCCCCCEEECHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHH YLKEFKI HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA