| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968954
Identifier: 123968954
GI number: 123968954
Start: 1194171
End: 1195199
Strand: Direct
Name: 123968954
Synonym: A9601_14211
Alternate gene names: NA
Gene position: 1194171-1195199 (Clockwise)
Preceding gene: 123968953
Following gene: 123968960
Centisome position: 71.51
GC content: 21.48
Gene sequence:
>1029_bases ATGTTTTGCTCTAGAAAAAAAACGTTCGAGATAAAGTCTATTGATCATAAATTTATTATTGATAAATCACAAATAATAGT ATTTATAACGCCCGCTAATACTGATATTATTTCAAGACTAGTTTATCAATTTGAAAATAATGATTCTTATAAAAAAAGGA AACTAATTTGTATTTATATTGATTTTTATCATGGATATAAATCTAATTTATATAATTTATTTACAAAGTTTTATAGAAGG ATAATTTATAACAGAAGGAACGACTTTTTAGAAGTTTCTTATAAATTAATGTCTTTATCAAATACTCTTATTTTAGGTTC TGATTTTCAGAGAGATAACCTTTTAACATTATATCCATTTTTAAAAAATAAGGATATTTATGTAATTCCAGATTATATTG AAGAAATTTTTCAGAAAAATGTAAAAATTAAAAAAATACCTGATATACAGAAAAAAATTAATATCCTATGGGAAGGAATT GGATATGGGGCCTTAATTCCATTACTTAAACTTGCTTTTTGTAGTTTTTTATTAAAAATTAAAAATATAAATTCAAAAAT AAATTTTTTAACAGATCCTGAAATATCAGCCTATAGTCGTCTTACAATTCCAACAAAATTAGTTGTCAATCTTCTCAAGT TAATTGGGACTGATATTCAATACAAGAAATGGACTAAGGAAAATTTAATTGAATTCTCAAAAAAAAGTGATATTGCGATT ATAACTGTCAATTCTCTTCACCCAGCAACAAAATACAAACCAGCTAATAAAATAAGATTATTATTATCTTTAGGTTTAGG TTTGGTTTTATGTCCGAATTTAGAAGACTATTTAAGATTTGAAAAAAAATATAGAAGAGTCATATCATATTCATCTATTA TAAACTGTTCAAAATTATTATTTAATATATTTGCAAATAGATCAAAATTTAAAAAATTAACTAATGAAAAAAATAAAATA TATTTTAATTCAATTAAATATAATTTAGAAATTGATGAAATTTGGGAAAAAGTTTTAACTATAAATTAA
Upstream 100 bases:
>100_bases AAGAATTCAAAATATGAGAAAAGATTCCTATCAAACAATAATAAATTATTTACCAGCATCGGAAGATTTTAGCCATCCTT CTGATAGGAGAGGGGTCAAA
Downstream 100 bases:
>100_bases TAAAAAATATTTTAAATTAATGCATTATAAATTTTAAATAACTCTGAAATAGTTTCATTTATTGAAAGATATTCTAAATT TTTGTCTTTACTTTTATAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MFCSRKKTFEIKSIDHKFIIDKSQIIVFITPANTDIISRLVYQFENNDSYKKRKLICIYIDFYHGYKSNLYNLFTKFYRR IIYNRRNDFLEVSYKLMSLSNTLILGSDFQRDNLLTLYPFLKNKDIYVIPDYIEEIFQKNVKIKKIPDIQKKINILWEGI GYGALIPLLKLAFCSFLLKIKNINSKINFLTDPEISAYSRLTIPTKLVVNLLKLIGTDIQYKKWTKENLIEFSKKSDIAI ITVNSLHPATKYKPANKIRLLLSLGLGLVLCPNLEDYLRFEKKYRRVISYSSIINCSKLLFNIFANRSKFKKLTNEKNKI YFNSIKYNLEIDEIWEKVLTIN
Sequences:
>Translated_342_residues MFCSRKKTFEIKSIDHKFIIDKSQIIVFITPANTDIISRLVYQFENNDSYKKRKLICIYIDFYHGYKSNLYNLFTKFYRR IIYNRRNDFLEVSYKLMSLSNTLILGSDFQRDNLLTLYPFLKNKDIYVIPDYIEEIFQKNVKIKKIPDIQKKINILWEGI GYGALIPLLKLAFCSFLLKIKNINSKINFLTDPEISAYSRLTIPTKLVVNLLKLIGTDIQYKKWTKENLIEFSKKSDIAI ITVNSLHPATKYKPANKIRLLLSLGLGLVLCPNLEDYLRFEKKYRRVISYSSIINCSKLLFNIFANRSKFKKLTNEKNKI YFNSIKYNLEIDEIWEKVLTIN >Mature_342_residues MFCSRKKTFEIKSIDHKFIIDKSQIIVFITPANTDIISRLVYQFENNDSYKKRKLICIYIDFYHGYKSNLYNLFTKFYRR IIYNRRNDFLEVSYKLMSLSNTLILGSDFQRDNLLTLYPFLKNKDIYVIPDYIEEIFQKNVKIKKIPDIQKKINILWEGI GYGALIPLLKLAFCSFLLKIKNINSKINFLTDPEISAYSRLTIPTKLVVNLLKLIGTDIQYKKWTKENLIEFSKKSDIAI ITVNSLHPATKYKPANKIRLLLSLGLGLVLCPNLEDYLRFEKKYRRVISYSSIINCSKLLFNIFANRSKFKKLTNEKNKI YFNSIKYNLEIDEIWEKVLTIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40488; Mature: 40488
Theoretical pI: Translated: 10.19; Mature: 10.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFCSRKKTFEIKSIDHKFIIDKSQIIVFITPANTDIISRLVYQFENNDSYKKRKLICIYI CCCCCCCCEEEECCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEE DFYHGYKSNLYNLFTKFYRRIIYNRRNDFLEVSYKLMSLSNTLILGSDFQRDNLLTLYPF EECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEH LKNKDIYVIPDYIEEIFQKNVKIKKIPDIQKKINILWEGIGYGALIPLLKLAFCSFLLKI HCCCCEEEECHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KNINSKINFLTDPEISAYSRLTIPTKLVVNLLKLIGTDIQYKKWTKENLIEFSKKSDIAI HCCCCCEEEEECCCCCCCEEECCCHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCCCEEE ITVNSLHPATKYKPANKIRLLLSLGLGLVLCPNLEDYLRFEKKYRRVISYSSIINCSKLL EEEECCCCCCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FNIFANRSKFKKLTNEKNKIYFNSIKYNLEIDEIWEKVLTIN HHHHHCHHHHHHHCCCCCEEEEEEEEEEEEHHHHHHHHHCCC >Mature Secondary Structure MFCSRKKTFEIKSIDHKFIIDKSQIIVFITPANTDIISRLVYQFENNDSYKKRKLICIYI CCCCCCCCEEEECCCCEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCCEEEEEEEE DFYHGYKSNLYNLFTKFYRRIIYNRRNDFLEVSYKLMSLSNTLILGSDFQRDNLLTLYPF EECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEH LKNKDIYVIPDYIEEIFQKNVKIKKIPDIQKKINILWEGIGYGALIPLLKLAFCSFLLKI HCCCCEEEECHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH KNINSKINFLTDPEISAYSRLTIPTKLVVNLLKLIGTDIQYKKWTKENLIEFSKKSDIAI HCCCCCEEEEECCCCCCCEEECCCHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCCCCEEE ITVNSLHPATKYKPANKIRLLLSLGLGLVLCPNLEDYLRFEKKYRRVISYSSIINCSKLL EEEECCCCCCCCCCHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH FNIFANRSKFKKLTNEKNKIYFNSIKYNLEIDEIWEKVLTIN HHHHHCHHHHHHHCCCCCEEEEEEEEEEEEHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA