| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968941
Identifier: 123968941
GI number: 123968941
Start: 1178879
End: 1180096
Strand: Reverse
Name: 123968941
Synonym: A9601_14081
Alternate gene names: NA
Gene position: 1180096-1178879 (Counterclockwise)
Preceding gene: 123968942
Following gene: 123968940
Centisome position: 70.67
GC content: 27.75
Gene sequence:
>1218_bases ATGTTTTTTAAAAAAAAATATGATATTTTATTAATCTGTAACGATGAAGATAAAGCAGAAATTAAAGATGGGAAGTATTT CTCAAAATTTTTAGATAGCTTGAAAATATTGTTGGAAACGTACAATCTAAAATCTCTTAGTTTAGCTTTGCCTTTTGCAA GAAGATATGGCGGATCAACTTACTCAAATGCAATTTCTGTCAATCTAGAAATTTTTTTTATCAAAGTTATACGAAAGGTG CTTCAAAAAATAAATTTATACAATGGCATTGAAATTTTTCTGAATAAATGTTCTTTGACAGAGGATAAGTTTTACCAAAA TTTTATAAAAAAATTCGGTATTAGATTAGTAATTTGCATTGGAGCTAATAAATATATTTGTCAAGCATGTAGGGAAAGTA AAATTAATATTGTTGAGTTACTTCATGGTTTAGGCTACTCAAAGATTCCATGGGGATGGAGTTATGAAGAAATTAAAAAT CTACCGACACATATATGGAGTCTTGATAGAGCAAGCACAAAAGTTTTTAAACCTCTTGAAGGTATGGGCATTATTCTGGA AGAGATAGAACATCCTTGGTACTCTCAATTTGAAAATTTTAAGGAAGGTTCTTTCGGCTCAATTTCATTCCTAAGTAAAA AAAATAGTCCAATAAAAAATAAAAAAGTTGTTCTTTTATCTTTAACCTGTGGTTATGACGGTGATGAAGGAACTTATTTA TATAGAAAGAATGTAATTAAAAATGGTTTAATTCCATCAAATTTAATGGAACTATTAGAAGATCAGAATCAAAATATTTT TTGGTTTATTAGAAGACACCCCAAGCAAGAAGCAAAGATGAAATATAATAATCAAAAGAAATTATTAGATCAAATTTGTA AGAAAAATAAAAATGTTGATTGGAGACAGGCAACTTCAGTATCATTACCCTATCTTTTGCCTTATGTAGATTGTCATATT ACTATGAATAGCCAAATTTGTTACGACACAGCTATATATGGGATAAAATCTCTTGGTCTTTGTCCAAGTTTGATCAAAGG AAACTCATATCAATTTGCATTTCAAGATCTTGAAGAGGCTAATTTGTTTAAAAGGGGAGTTTCTAAAAAAGATGATATTC TTAGCTTTATTTTGGAATCAAAAAAGATTAAACCATTTAAATTAACTTGTAGAAATAGGGATGATTTTGTAAAAACAATT TATAGAGCTATTAAATAA
Upstream 100 bases:
>100_bases ATATTTTCAATAAACCATTTGAATATTATTTAAAAAAATTTGTTCTTTAGTATTTACATAACCACTTTAAATTTCCAAAA ATATTTATTCATAGTTATTA
Downstream 100 bases:
>100_bases ATTTTAAAGAAATATTTTGAAAAATTTCTTATTGATTTAAATTAAAAAATTTAACGAATTAACATATGTTAAACTTTCTA AAATCTTAAATTAAAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 405; Mature: 405
Protein sequence:
>405_residues MFFKKKYDILLICNDEDKAEIKDGKYFSKFLDSLKILLETYNLKSLSLALPFARRYGGSTYSNAISVNLEIFFIKVIRKV LQKINLYNGIEIFLNKCSLTEDKFYQNFIKKFGIRLVICIGANKYICQACRESKINIVELLHGLGYSKIPWGWSYEEIKN LPTHIWSLDRASTKVFKPLEGMGIILEEIEHPWYSQFENFKEGSFGSISFLSKKNSPIKNKKVVLLSLTCGYDGDEGTYL YRKNVIKNGLIPSNLMELLEDQNQNIFWFIRRHPKQEAKMKYNNQKKLLDQICKKNKNVDWRQATSVSLPYLLPYVDCHI TMNSQICYDTAIYGIKSLGLCPSLIKGNSYQFAFQDLEEANLFKRGVSKKDDILSFILESKKIKPFKLTCRNRDDFVKTI YRAIK
Sequences:
>Translated_405_residues MFFKKKYDILLICNDEDKAEIKDGKYFSKFLDSLKILLETYNLKSLSLALPFARRYGGSTYSNAISVNLEIFFIKVIRKV LQKINLYNGIEIFLNKCSLTEDKFYQNFIKKFGIRLVICIGANKYICQACRESKINIVELLHGLGYSKIPWGWSYEEIKN LPTHIWSLDRASTKVFKPLEGMGIILEEIEHPWYSQFENFKEGSFGSISFLSKKNSPIKNKKVVLLSLTCGYDGDEGTYL YRKNVIKNGLIPSNLMELLEDQNQNIFWFIRRHPKQEAKMKYNNQKKLLDQICKKNKNVDWRQATSVSLPYLLPYVDCHI TMNSQICYDTAIYGIKSLGLCPSLIKGNSYQFAFQDLEEANLFKRGVSKKDDILSFILESKKIKPFKLTCRNRDDFVKTI YRAIK >Mature_405_residues MFFKKKYDILLICNDEDKAEIKDGKYFSKFLDSLKILLETYNLKSLSLALPFARRYGGSTYSNAISVNLEIFFIKVIRKV LQKINLYNGIEIFLNKCSLTEDKFYQNFIKKFGIRLVICIGANKYICQACRESKINIVELLHGLGYSKIPWGWSYEEIKN LPTHIWSLDRASTKVFKPLEGMGIILEEIEHPWYSQFENFKEGSFGSISFLSKKNSPIKNKKVVLLSLTCGYDGDEGTYL YRKNVIKNGLIPSNLMELLEDQNQNIFWFIRRHPKQEAKMKYNNQKKLLDQICKKNKNVDWRQATSVSLPYLLPYVDCHI TMNSQICYDTAIYGIKSLGLCPSLIKGNSYQFAFQDLEEANLFKRGVSKKDDILSFILESKKIKPFKLTCRNRDDFVKTI YRAIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47174; Mature: 47174
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFFKKKYDILLICNDEDKAEIKDGKYFSKFLDSLKILLETYNLKSLSLALPFARRYGGST CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEECHHHHHCCCCC YSNAISVNLEIFFIKVIRKVLQKINLYNGIEIFLNKCSLTEDKFYQNFIKKFGIRLVICI CCCEEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEE GANKYICQACRESKINIVELLHGLGYSKIPWGWSYEEIKNLPTHIWSLDRASTKVFKPLE CCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHCCHHHHHHHCCCC GMGIILEEIEHPWYSQFENFKEGSFGSISFLSKKNSPIKNKKVVLLSLTCGYDGDEGTYL CCHHHHHHHCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCCCEE YRKNVIKNGLIPSNLMELLEDQNQNIFWFIRRHPKQEAKMKYNNQKKLLDQICKKNKNVD EEHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCHHHHHHHHHHCCCCCC WRQATSVSLPYLLPYVDCHITMNSQICYDTAIYGIKSLGLCPSLIKGNSYQFAFQDLEEA HHHHCCCCCCHHEEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHCCCCEEEHHHHHHHH NLFKRGVSKKDDILSFILESKKIKPFKLTCRNRDDFVKTIYRAIK HHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCC >Mature Secondary Structure MFFKKKYDILLICNDEDKAEIKDGKYFSKFLDSLKILLETYNLKSLSLALPFARRYGGST CCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEECHHHHHCCCCC YSNAISVNLEIFFIKVIRKVLQKINLYNGIEIFLNKCSLTEDKFYQNFIKKFGIRLVICI CCCEEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEE GANKYICQACRESKINIVELLHGLGYSKIPWGWSYEEIKNLPTHIWSLDRASTKVFKPLE CCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHHCCHHHHHHHCCCC GMGIILEEIEHPWYSQFENFKEGSFGSISFLSKKNSPIKNKKVVLLSLTCGYDGDEGTYL CCHHHHHHHCCCHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCCCCEE YRKNVIKNGLIPSNLMELLEDQNQNIFWFIRRHPKQEAKMKYNNQKKLLDQICKKNKNVD EEHHHHHCCCCHHHHHHHHHCCCCCEEEEEECCCCHHHHHCCCCHHHHHHHHHHCCCCCC WRQATSVSLPYLLPYVDCHITMNSQICYDTAIYGIKSLGLCPSLIKGNSYQFAFQDLEEA HHHHCCCCCCHHEEEEEEEEEECCCCHHHHHHHHHHHHCCCHHHHCCCCEEEHHHHHHHH NLFKRGVSKKDDILSFILESKKIKPFKLTCRNRDDFVKTIYRAIK HHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA