| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is fmt [C]
Identifier: 123968876
GI number: 123968876
Start: 1118699
End: 1119496
Strand: Direct
Name: fmt [C]
Synonym: A9601_13431
Alternate gene names: 123968876
Gene position: 1118699-1119496 (Clockwise)
Preceding gene: 123968875
Following gene: 123968877
Centisome position: 66.99
GC content: 29.57
Gene sequence:
>798_bases ATGACAATAGTTTTAATAACGGGGACTCAAAATAGACACCTAAGTATAGCTTCAAAACTTATAGATAATTTTGAAGTTAT TTGGATTAGATATAAAAGAAAATTAGTTCCTCAAGTTGATCAAATTCAGTCGAATTTTCTTAAAGAGCATCTTGAAAAAC TTGTTAAAGATGAGACAGATGAGTTAGGTATTTTTAATATAAATGAGATTCTCAAGAGTAAGAATATTATTAAAAGTTTG GAAATCGATTCTTTAAAGAATTTCAATGAGTTATCTCCAAAGTTTCTAGAAAGTTTTGAATTTAATGCAGATGCTACTGT TATATATGGGAGCGGTATAATAGGTGATGATTTCATGAAAGTCCTGCCACAACCTCTTATAAATATCCATGGCGGGATTT CGCCATATTTCAAAGGTTCAAGTACACTTTTGTACGCTTTAGCCTTAGGTCAACCTGAACTATTAGGGATGACGATTCAT GAGATTGATTCTGGCATAGATTCGGGAGATATATTTTGTCACTTGCTTCCTGATCTTAAGTTTGGGATGAGTCCAACAAA AATGTTTGCATCTTGTCAAAAAAAATTATACGAAGAAATTGAAAATATTATTAATAAAATAATAGAAGGGAGCTTGACTT CAGTGCCACAATCTAAGTTTGGAAGAACATTTATGGAAAGAGATTATAGAGAAGCTATTCTTAAAAGTATTTACACAATG TATGAAGAAGGTTTTTTTAATTTATCAATTTCTGAATTAAAGAAATTAAGAAATAAATATAAATTAAGAGAATGTTAG
Upstream 100 bases:
>100_bases AAAAGGTGTGGTCTCATCTGAGTATTCAAGGCTAGATATTGATACAATGCTTGACTTTAGATTTATCGAAAGCTTATTAA AAATAGTCAAATAGAATTTA
Downstream 100 bases:
>100_bases AAGTAACTTTATTAGGAAATGGGCCTTCATTATCTAATATAAATTTTGGAGAAACTATTAATAAAAGTAATTTTATAATT AGTTGTAATAGAATTTTCCT
Product: hypothetical protein
Products: tetrahydrofolate; N-formylmethionyl-tRNA [C]
Alternate protein names: Formyl Transferase Domain-Containing Protein
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MTIVLITGTQNRHLSIASKLIDNFEVIWIRYKRKLVPQVDQIQSNFLKEHLEKLVKDETDELGIFNINEILKSKNIIKSL EIDSLKNFNELSPKFLESFEFNADATVIYGSGIIGDDFMKVLPQPLINIHGGISPYFKGSSTLLYALALGQPELLGMTIH EIDSGIDSGDIFCHLLPDLKFGMSPTKMFASCQKKLYEEIENIINKIIEGSLTSVPQSKFGRTFMERDYREAILKSIYTM YEEGFFNLSISELKKLRNKYKLREC
Sequences:
>Translated_265_residues MTIVLITGTQNRHLSIASKLIDNFEVIWIRYKRKLVPQVDQIQSNFLKEHLEKLVKDETDELGIFNINEILKSKNIIKSL EIDSLKNFNELSPKFLESFEFNADATVIYGSGIIGDDFMKVLPQPLINIHGGISPYFKGSSTLLYALALGQPELLGMTIH EIDSGIDSGDIFCHLLPDLKFGMSPTKMFASCQKKLYEEIENIINKIIEGSLTSVPQSKFGRTFMERDYREAILKSIYTM YEEGFFNLSISELKKLRNKYKLREC >Mature_264_residues TIVLITGTQNRHLSIASKLIDNFEVIWIRYKRKLVPQVDQIQSNFLKEHLEKLVKDETDELGIFNINEILKSKNIIKSLE IDSLKNFNELSPKFLESFEFNADATVIYGSGIIGDDFMKVLPQPLINIHGGISPYFKGSSTLLYALALGQPELLGMTIHE IDSGIDSGDIFCHLLPDLKFGMSPTKMFASCQKKLYEEIENIINKIIEGSLTSVPQSKFGRTFMERDYREAILKSIYTMY EEGFFNLSISELKKLRNKYKLREC
Specific function: Modifies The Free Amino Group Of The Aminoacyl Moiety Of Methionyl-Trna(Fmet). The Formyl Group Appears To Play A Dual Role In The Initiator Identity Of N-Formylmethionyl-Trna By: (I) Promoting Its Recognition By If2 And (II) Impairing Its Binding To Eftu
COG id: COG0223
COG function: function code J; Methionyl-tRNA formyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 400 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.1.2.9 [C]
Molecular weight: Translated: 30348; Mature: 30216
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIVLITGTQNRHLSIASKLIDNFEVIWIRYKRKLVPQVDQIQSNFLKEHLEKLVKDETD CEEEEEECCCCCHHHHHHHHHCCHHEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCC ELGIFNINEILKSKNIIKSLEIDSLKNFNELSPKFLESFEFNADATVIYGSGIIGDDFMK CCCCEEHHHHHHHHHHHHHHCHHHHCCCHHCCHHHHHHHCCCCCEEEEEECCCCCHHHHH VLPQPLINIHGGISPYFKGSSTLLYALALGQPELLGMTIHEIDSGIDSGDIFCHLLPDLK HCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCHH FGMSPTKMFASCQKKLYEEIENIINKIIEGSLTSVPQSKFGRTFMERDYREAILKSIYTM CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YEEGFFNLSISELKKLRNKYKLREC HHCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure TIVLITGTQNRHLSIASKLIDNFEVIWIRYKRKLVPQVDQIQSNFLKEHLEKLVKDETD EEEEEECCCCCHHHHHHHHHCCHHEEEEEEHHHHCCHHHHHHHHHHHHHHHHHHHCCCC ELGIFNINEILKSKNIIKSLEIDSLKNFNELSPKFLESFEFNADATVIYGSGIIGDDFMK CCCCEEHHHHHHHHHHHHHHCHHHHCCCHHCCHHHHHHHCCCCCEEEEEECCCCCHHHHH VLPQPLINIHGGISPYFKGSSTLLYALALGQPELLGMTIHEIDSGIDSGDIFCHLLPDLK HCCHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEEEECCCHH FGMSPTKMFASCQKKLYEEIENIINKIIEGSLTSVPQSKFGRTFMERDYREAILKSIYTM CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH YEEGFFNLSISELKKLRNKYKLREC HHCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Ca2+; K+; Mg2+; Na+; NH4+ [C]
Kcat value (1/min): 1200 [C]
Specific activity: 1.14
Km value (mM): 0.013 {10-formyltetrahydrofolate}} 0.0013 {phenylalanyl-tRNAfMet}} 0.0014 {valyl-tRNAfMet}} 0.0006 {methionyl-tRNAfMet}} 0.00035 {methionyl-tRNAfMet}} [C]
Substrates: Formyltetrahydrofolate; L-methionyl-tRNA; H2O [C]
Specific reaction: Formyltetrahydrofolate + L-methionyl-tRNA + H2O =tetrahydrofolate + N-formylmethionyl-tRNA [C]
General reaction: Formyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA