| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968871
Identifier: 123968871
GI number: 123968871
Start: 1113333
End: 1113584
Strand: Direct
Name: 123968871
Synonym: A9601_13381
Alternate gene names: NA
Gene position: 1113333-1113584 (Clockwise)
Preceding gene: 123968870
Following gene: 123968873
Centisome position: 66.67
GC content: 34.52
Gene sequence:
>252_bases TTGAAAGATAAAAAAATTAAAATTCTATGGGCAAATAATAACGAGACCTATGCTTCTGAGGGAGATGATTGGTTCTCAAC TGCAGAAAAAGCAGGTTTAGAAATTCCAACTGGCTGCTTAACAGGTAGTTGCGGTGCCTGTGAGATAGATGTAAATGGTA AAACGATAAGGGCTTGTATAAGCGATATTAAAAGCAATAAAAAAAGTCTATTAAAAGTTTCTTTAACTACAGATCCCTTT TGGGAAAGCTAA
Upstream 100 bases:
>100_bases TCAATAAAAAATCAATATCTTATAAAAAGAAAAGAGAATCAATTATTGATAATCTTGCCAACGAATTTGATAAACATCTA AATATCACATCATTACTAAA
Downstream 100 bases:
>100_bases ATCTTATATTCTTTTTTAATATAAAAAATTCAAATTAATTCCAAACGTATATTCTTCATTTTTAAGAATTTGTCCTATAT CTTGAACTCCTACAGCATTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MKDKKIKILWANNNETYASEGDDWFSTAEKAGLEIPTGCLTGSCGACEIDVNGKTIRACISDIKSNKKSLLKVSLTTDPF WES
Sequences:
>Translated_83_residues MKDKKIKILWANNNETYASEGDDWFSTAEKAGLEIPTGCLTGSCGACEIDVNGKTIRACISDIKSNKKSLLKVSLTTDPF WES >Mature_83_residues MKDKKIKILWANNNETYASEGDDWFSTAEKAGLEIPTGCLTGSCGACEIDVNGKTIRACISDIKSNKKSLLKVSLTTDPF WES
Specific function: Unknown
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9088; Mature: 9088
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDKKIKILWANNNETYASEGDDWFSTAEKAGLEIPTGCLTGSCGACEIDVNGKTIRACI CCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHH SDIKSNKKSLLKVSLTTDPFWES HHHHCCCCEEEEEECCCCCCCCC >Mature Secondary Structure MKDKKIKILWANNNETYASEGDDWFSTAEKAGLEIPTGCLTGSCGACEIDVNGKTIRACI CCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEECCCHHHHHHH SDIKSNKKSLLKVSLTTDPFWES HHHHCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA