| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968873
Identifier: 123968873
GI number: 123968873
Start: 1115974
End: 1116993
Strand: Direct
Name: 123968873
Synonym: A9601_13401
Alternate gene names: NA
Gene position: 1115974-1116993 (Clockwise)
Preceding gene: 123968871
Following gene: 123968874
Centisome position: 66.83
GC content: 27.25
Gene sequence:
>1020_bases ATGAAGAAAAAACAAGTTTTAATTATAGGCTATGGTTCTATTGGGAAGAAATATGGAGACTATTTAAAGGATCAAGATAA ATATGATATATCAATTGTAGATCCATCCTCTAAGGCACTTAAAGAAGCAAAAACAAATAATTTCGAAGTTTTTGAAGAAT TAAATGAAAAAGTTTTTAAAAACCAATTTGATTATGGGATTGTTTCAAACTGGGGTCCAGATCATACAAATACATGTGAT TTGATTATCAAAAATCAAATAGAGAAAATCACGGTAGAAAAACCATTTTGTAATAATCTTTTTTTAGGAGAAAAGTTATT AGAAAAAATTAATAGAGATAAAATTAAAGTTAATGTTCACTTTAGATGGCCTTATATTGGCTTAATTGAGGAAATACAAT TTATTGAAAAAAAATTTAATCTTGGAACTATATCTTCAATTAATATTATTGGAGGCGCGAATTGCTTAAGCACAGGCGGC ATTCATTGGATGGATTTTGCTTGTAGGCACTTTAAAAGTATGCCCAAAATAATTTCTAGTTTAAATAATTGCGATAAAAT AAATCCAAGGAGTAAAGAATTAATCTACATAGACGGCTCCAGCGTTTTTATTTTTGAAAATAATAAAAGACTTTTTTTTA ATTTAGACAACAATAGTTCAATTGCATCGGAAACCAAATTAGTTTATAAGCATGGATACATAACTATAGATTCCAAATCA ATTATTAGAGTTTACAAAAGAAATAAGAAGGAAATTGAAATTGCTGAGAATCAAATAACAAGGTATGGAATTGCAAATCT AATTTATGAATCAAAAATTCTTCAAAATAAATCATCAATTCCAAATGTTGTAGAAGAGATATTTGATGATAACAAAAATG AAATGATTTGTTCAGCTTTTGATGGATTAAGAGCCTCAAGAATGTTAATCTTATGTCTTGAAAGCTCTAAATTAGGCAAA CAATTAAATTACCATCAACATGCGGAAATAGAGTTTAACAACTCCTGGAATATAAGCTAA
Upstream 100 bases:
>100_bases AGCCAGAAATAATAATATTTCCAAATATTTTTAAAAACTTGGAGTTTATAACACCCTTAATGATAAATTTTATTATTTAA GTCCTATTTTTTAAAAATTT
Downstream 100 bases:
>100_bases TGGAACTTCTTTACATAGGATCTGGACCAATTTCTAATTTTCACTTGCCCGCATTAGTGAAAAGTGGCTTCTCCATAAAA AAAATAGCTACAAGAGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MKKKQVLIIGYGSIGKKYGDYLKDQDKYDISIVDPSSKALKEAKTNNFEVFEELNEKVFKNQFDYGIVSNWGPDHTNTCD LIIKNQIEKITVEKPFCNNLFLGEKLLEKINRDKIKVNVHFRWPYIGLIEEIQFIEKKFNLGTISSINIIGGANCLSTGG IHWMDFACRHFKSMPKIISSLNNCDKINPRSKELIYIDGSSVFIFENNKRLFFNLDNNSSIASETKLVYKHGYITIDSKS IIRVYKRNKKEIEIAENQITRYGIANLIYESKILQNKSSIPNVVEEIFDDNKNEMICSAFDGLRASRMLILCLESSKLGK QLNYHQHAEIEFNNSWNIS
Sequences:
>Translated_339_residues MKKKQVLIIGYGSIGKKYGDYLKDQDKYDISIVDPSSKALKEAKTNNFEVFEELNEKVFKNQFDYGIVSNWGPDHTNTCD LIIKNQIEKITVEKPFCNNLFLGEKLLEKINRDKIKVNVHFRWPYIGLIEEIQFIEKKFNLGTISSINIIGGANCLSTGG IHWMDFACRHFKSMPKIISSLNNCDKINPRSKELIYIDGSSVFIFENNKRLFFNLDNNSSIASETKLVYKHGYITIDSKS IIRVYKRNKKEIEIAENQITRYGIANLIYESKILQNKSSIPNVVEEIFDDNKNEMICSAFDGLRASRMLILCLESSKLGK QLNYHQHAEIEFNNSWNIS >Mature_339_residues MKKKQVLIIGYGSIGKKYGDYLKDQDKYDISIVDPSSKALKEAKTNNFEVFEELNEKVFKNQFDYGIVSNWGPDHTNTCD LIIKNQIEKITVEKPFCNNLFLGEKLLEKINRDKIKVNVHFRWPYIGLIEEIQFIEKKFNLGTISSINIIGGANCLSTGG IHWMDFACRHFKSMPKIISSLNNCDKINPRSKELIYIDGSSVFIFENNKRLFFNLDNNSSIASETKLVYKHGYITIDSKS IIRVYKRNKKEIEIAENQITRYGIANLIYESKILQNKSSIPNVVEEIFDDNKNEMICSAFDGLRASRMLILCLESSKLGK QLNYHQHAEIEFNNSWNIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39141; Mature: 39141
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKQVLIIGYGSIGKKYGDYLKDQDKYDISIVDPSSKALKEAKTNNFEVFEELNEKVFK CCCCEEEEEEECCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHH NQFDYGIVSNWGPDHTNTCDLIIKNQIEKITVEKPFCNNLFLGEKLLEKINRDKIKVNVH CCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEE FRWPYIGLIEEIQFIEKKFNLGTISSINIIGGANCLSTGGIHWMDFACRHFKSMPKIISS EECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHH LNNCDKINPRSKELIYIDGSSVFIFENNKRLFFNLDNNSSIASETKLVYKHGYITIDSKS HCCCCCCCCCCCEEEEEECCEEEEEECCCEEEEEECCCCCCCHHCEEEEECCEEEECCHH IIRVYKRNKKEIEIAENQITRYGIANLIYESKILQNKSSIPNVVEEIFDDNKNEMICSAF HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEHH DGLRASRMLILCLESSKLGKQLNYHQHAEIEFNNSWNIS CCCCCCEEEEEEECCCHHHHHCCCCCCEEEEECCCCCCC >Mature Secondary Structure MKKKQVLIIGYGSIGKKYGDYLKDQDKYDISIVDPSSKALKEAKTNNFEVFEELNEKVFK CCCCEEEEEEECCHHHHHHHHHCCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHH NQFDYGIVSNWGPDHTNTCDLIIKNQIEKITVEKPFCNNLFLGEKLLEKINRDKIKVNVH CCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCEEEEEEE FRWPYIGLIEEIQFIEKKFNLGTISSINIIGGANCLSTGGIHWMDFACRHFKSMPKIISS EECCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHCCCCCHHHHHHHHHHHHHHHHHHH LNNCDKINPRSKELIYIDGSSVFIFENNKRLFFNLDNNSSIASETKLVYKHGYITIDSKS HCCCCCCCCCCCEEEEEECCEEEEEECCCEEEEEECCCCCCCHHCEEEEECCEEEECCHH IIRVYKRNKKEIEIAENQITRYGIANLIYESKILQNKSSIPNVVEEIFDDNKNEMICSAF HHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEHH DGLRASRMLILCLESSKLGKQLNYHQHAEIEFNNSWNIS CCCCCCEEEEEEECCCHHHHHCCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA