| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968856
Identifier: 123968856
GI number: 123968856
Start: 1101505
End: 1102083
Strand: Direct
Name: 123968856
Synonym: A9601_13231
Alternate gene names: NA
Gene position: 1101505-1102083 (Clockwise)
Preceding gene: 123968851
Following gene: 123968857
Centisome position: 65.96
GC content: 35.75
Gene sequence:
>579_bases ATGAGTATAAAAGCAATCGAATGTCCTGATGGAGTGTGCCACAGTCATCATGGTGGTCATGCTGTTCCAAGGCAAGCTAT GCAGAAAAATCTAGAAAAGCATGGTAAAGATTGGTGCGAGAAATTAGCAGAGAGAATTTATGAAATGTCAGTTGATACTT ATTCACAGACAGTCATGCCTAGTCTCCACTCAGCAGGTTGGCAAAGAAGACATTTAGATTGGGAATTTAAGCTAGCAGAA AATGATTCTGAACCTGATGAAGCTCTTGTTGAAGGAATTATAAATGCCACAGAAAGCTTTCTAAGGAGTAGTGAGGTTCA TCGATTATTTATTCAAGAATTAGTTCAAGGCACATTCGAAGAAGCAAATGATAAAAAAATAATTTCTAAAGCAATAAAGT CTATCATTGAAGAAGAAATTGTTAGTTCACTAAGAGAAAAGAAAGAAACTCTTTTAAAGAAAATATCCGAAAAATTAATA TCAGAAGAAAAAGTTAGCGAGGAACTTGCAATAAATTCAGCAAAAGAGGGTTTTGAGGAAGTTGAAAGGCTACTTGCTAA CCACAGCGAGGCAGTCTAA
Upstream 100 bases:
>100_bases ATAAATTGAAGAAAGTCAAAAGTCTTGGATTTTTGTTAAAAATATATTTTCTTTTCTGTAAAAAATAGCTATCTAGAATA TATAAGTACTAAATAATCCA
Downstream 100 bases:
>100_bases CTCTATTTCTTTATATTTTCTTTGTATTTAATCTAGAAATTGGCTCAAATATAAATTAAAGATTAAATTATTGTTTGGAA GTACGAAGTTGTAACTTATT
Product: EF-1 guanine nucleotide exchange domain-containing protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MSIKAIECPDGVCHSHHGGHAVPRQAMQKNLEKHGKDWCEKLAERIYEMSVDTYSQTVMPSLHSAGWQRRHLDWEFKLAE NDSEPDEALVEGIINATESFLRSSEVHRLFIQELVQGTFEEANDKKIISKAIKSIIEEEIVSSLREKKETLLKKISEKLI SEEKVSEELAINSAKEGFEEVERLLANHSEAV
Sequences:
>Translated_192_residues MSIKAIECPDGVCHSHHGGHAVPRQAMQKNLEKHGKDWCEKLAERIYEMSVDTYSQTVMPSLHSAGWQRRHLDWEFKLAE NDSEPDEALVEGIINATESFLRSSEVHRLFIQELVQGTFEEANDKKIISKAIKSIIEEEIVSSLREKKETLLKKISEKLI SEEKVSEELAINSAKEGFEEVERLLANHSEAV >Mature_191_residues SIKAIECPDGVCHSHHGGHAVPRQAMQKNLEKHGKDWCEKLAERIYEMSVDTYSQTVMPSLHSAGWQRRHLDWEFKLAEN DSEPDEALVEGIINATESFLRSSEVHRLFIQELVQGTFEEANDKKIISKAIKSIIEEEIVSSLREKKETLLKKISEKLIS EEKVSEELAINSAKEGFEEVERLLANHSEAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21867; Mature: 21736
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKAIECPDGVCHSHHGGHAVPRQAMQKNLEKHGKDWCEKLAERIYEMSVDTYSQTVMP CCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLHSAGWQRRHLDWEFKLAENDSEPDEALVEGIINATESFLRSSEVHRLFIQELVQGTFE HHHHCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EANDKKIISKAIKSIIEEEIVSSLREKKETLLKKISEKLISEEKVSEELAINSAKEGFEE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VERLLANHSEAV HHHHHHHCCCCC >Mature Secondary Structure SIKAIECPDGVCHSHHGGHAVPRQAMQKNLEKHGKDWCEKLAERIYEMSVDTYSQTVMP CCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLHSAGWQRRHLDWEFKLAENDSEPDEALVEGIINATESFLRSSEVHRLFIQELVQGTFE HHHHCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EANDKKIISKAIKSIIEEEIVSSLREKKETLLKKISEKLISEEKVSEELAINSAKEGFEE HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VERLLANHSEAV HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA