Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is cdsA [H]

Identifier: 123968724

GI number: 123968724

Start: 1006682

End: 1007539

Strand: Direct

Name: cdsA [H]

Synonym: A9601_11911

Alternate gene names: 123968724

Gene position: 1006682-1007539 (Clockwise)

Preceding gene: 123968723

Following gene: 123968729

Centisome position: 60.28

GC content: 30.89

Gene sequence:

>858_bases
ATGAGATTAAGAAGCGGTCTACTTATAGGAATTTTTGGTTTAATTGTTGTTTTGATGGGGGGATGGTTTTTTACATTGGC
AACTGCGATGCTTACATATCTAGCATTATTGGAATTTTTTAGAATGGCAGAATTTAAAGGAATAAGACCAGCTACAAAAA
CCACATTATTTTCATCCTTTATAATTATAGTTTCTACTTATCTTGAGACTATAGGTTTGATTGAAGGAGAAATTTCAAAT
TCAATTTTGCCAATCTGTTCAGTTGGGATATGTACTTGGTTACTTTTGCAGCCAAAACCTGGGACAATTTCAGATATTGC
AGCCTCTATTTTTGGATTATTCTATTTAGGTTTTTTACCTAGTTACTGGATTAAGTTAAGGGGATTAGATTCAGTGATAA
TCAGTTCAAATCAAGGGTTTATATCGTTTGAGAACTTATCAAATACTACAGGTCTGCATTTAACTTTAACTTCTTGCTTT
TTAATTGTAGCTAGTGATATTGGTTCTTATTTCATTGGGAAGTCATTTGGTAAAAAATCTCTATCTCCAATATCTCCTAG
CAAAACTATAGAAGGTTTAATTGGAGGAATATCCTGTTCAACTTTACTAGCAATATTTTTCGCATTTTTATTGAATTGGG
AAAATCCATTATTTGTTGGAATAATATATGGAATTTCAATTTCTCTTATGGCATTGGTTGGAGATTTAATTGAATCTATG
ATGAAGAGAGATGCAAAAATAAAAGATTCCGGAACTTTTTTACCGGGACATGGAGGGATTCTTGACAGAATTGACAGTTA
CATCTTTACTCCATCTGTTTTGTATTATATTTTTATAATTCTCAAGTATTTAAATTAA

Upstream 100 bases:

>100_bases
AATTGATTTAGATAGGTTTAATTGGATAAATAATCAAAGTTTATGCAACAAGGATCTGGTAAATTTTAATATAAGAGTCT
TAGAAACATAGCAATTTCAT

Downstream 100 bases:

>100_bases
TTAAGAAATCTTTTATTCCAAAAAATAATCTTGGATTATTTTACTAGATAATGATGGAAGATCTATATGCGGAAGATGTC
CACAATTTTGTAACCCTACA

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MRLRSGLLIGIFGLIVVLMGGWFFTLATAMLTYLALLEFFRMAEFKGIRPATKTTLFSSFIIIVSTYLETIGLIEGEISN
SILPICSVGICTWLLLQPKPGTISDIAASIFGLFYLGFLPSYWIKLRGLDSVIISSNQGFISFENLSNTTGLHLTLTSCF
LIVASDIGSYFIGKSFGKKSLSPISPSKTIEGLIGGISCSTLLAIFFAFLLNWENPLFVGIIYGISISLMALVGDLIESM
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYIFIILKYLN

Sequences:

>Translated_285_residues
MRLRSGLLIGIFGLIVVLMGGWFFTLATAMLTYLALLEFFRMAEFKGIRPATKTTLFSSFIIIVSTYLETIGLIEGEISN
SILPICSVGICTWLLLQPKPGTISDIAASIFGLFYLGFLPSYWIKLRGLDSVIISSNQGFISFENLSNTTGLHLTLTSCF
LIVASDIGSYFIGKSFGKKSLSPISPSKTIEGLIGGISCSTLLAIFFAFLLNWENPLFVGIIYGISISLMALVGDLIESM
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYIFIILKYLN
>Mature_285_residues
MRLRSGLLIGIFGLIVVLMGGWFFTLATAMLTYLALLEFFRMAEFKGIRPATKTTLFSSFIIIVSTYLETIGLIEGEISN
SILPICSVGICTWLLLQPKPGTISDIAASIFGLFYLGFLPSYWIKLRGLDSVIISSNQGFISFENLSNTTGLHLTLTSCF
LIVASDIGSYFIGKSFGKKSLSPISPSKTIEGLIGGISCSTLLAIFFAFLLNWENPLFVGIIYGISISLMALVGDLIESM
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYIFIILKYLN

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=107, Percent_Identity=45.7943925233645, Blast_Score=97, Evalue=1e-21,
Organism=Escherichia coli, GI1787677, Length=114, Percent_Identity=43.859649122807, Blast_Score=95, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 31267; Mature: 31267

Theoretical pI: Translated: 8.29; Mature: 8.29

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLRSGLLIGIFGLIVVLMGGWFFTLATAMLTYLALLEFFRMAEFKGIRPATKTTLFSSF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IIIVSTYLETIGLIEGEISNSILPICSVGICTWLLLQPKPGTISDIAASIFGLFYLGFLP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHH
SYWIKLRGLDSVIISSNQGFISFENLSNTTGLHLTLTSCFLIVASDIGSYFIGKSFGKKS
HHHHHHCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LSPISPSKTIEGLIGGISCSTLLAIFFAFLLNWENPLFVGIIYGISISLMALVGDLIESM
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYIFIILKYLN
HHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLRSGLLIGIFGLIVVLMGGWFFTLATAMLTYLALLEFFRMAEFKGIRPATKTTLFSSF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IIIVSTYLETIGLIEGEISNSILPICSVGICTWLLLQPKPGTISDIAASIFGLFYLGFLP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHH
SYWIKLRGLDSVIISSNQGFISFENLSNTTGLHLTLTSCFLIVASDIGSYFIGKSFGKKS
HHHHHHCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LSPISPSKTIEGLIGGISCSTLLAIFFAFLLNWENPLFVGIIYGISISLMALVGDLIESM
CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYIFIILKYLN
HHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]