| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is yuiD [H]
Identifier: 123968709
GI number: 123968709
Start: 991105
End: 991584
Strand: Direct
Name: yuiD [H]
Synonym: A9601_11761
Alternate gene names: 123968709
Gene position: 991105-991584 (Clockwise)
Preceding gene: 123968708
Following gene: 123968711
Centisome position: 59.35
GC content: 34.38
Gene sequence:
>480_bases ATGTCTGATTTTTTTGCCTTTTTTAATAATTCAGTTCTTTTTTGGAGTTTATTATCCTGTTTACTGGCTCAATTTTTTAA AATTTTATTTAATTTCTTTTCCACTGGGGAGATAAGATTTGGAATTATGTTCGAGACTGGTGGGATGCCTTCAAGTCATT CCGCGCTAATAACTGGTGCTGCATCAGGTATAGGTTATGAATTAGGATTTGATAGCTCTATATTCGCGTTAGCAGTTGCT GTAGCACTTATAGTTATGTATGACGCTAGTGGAGTTCGAAAATCAGCTGGGATTCAAGCTGCAGAAATCAATAAACTATC AAAAAAACTAGACCCTAAATCTGAATTATTTTTGAAGGAAACCCTAGGCCATACAAAAATTGAGGTCATGGTGGGAAGTT TTTTAGGACCTTTAGTTACTTTGCCTGGAATGTTTTTTTTAGGTTCTCCTCTCACAATTTTTGATTTGATAATAAACTAG
Upstream 100 bases:
>100_bases AAAGCAAAAAAAGCAATTGAACCTTGGGGGCCAGATGCAAAGTATTTAATATCATTAGCCGATTTCATTACAAATAGAGA TAGATAAATAGTTTAAATTT
Downstream 100 bases:
>100_bases TAATCCTTTGGAAAACTAATTTGGGTGGCATCTATAAAGTTTTTTGCGACTTCTGGAGAACTTGGCAAATGTAAGTGAAT CCAACTTGCATGTAATTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSDFFAFFNNSVLFWSLLSCLLAQFFKILFNFFSTGEIRFGIMFETGGMPSSHSALITGAASGIGYELGFDSSIFALAVA VALIVMYDASGVRKSAGIQAAEINKLSKKLDPKSELFLKETLGHTKIEVMVGSFLGPLVTLPGMFFLGSPLTIFDLIIN
Sequences:
>Translated_159_residues MSDFFAFFNNSVLFWSLLSCLLAQFFKILFNFFSTGEIRFGIMFETGGMPSSHSALITGAASGIGYELGFDSSIFALAVA VALIVMYDASGVRKSAGIQAAEINKLSKKLDPKSELFLKETLGHTKIEVMVGSFLGPLVTLPGMFFLGSPLTIFDLIIN >Mature_158_residues SDFFAFFNNSVLFWSLLSCLLAQFFKILFNFFSTGEIRFGIMFETGGMPSSHSALITGAASGIGYELGFDSSIFALAVAV ALIVMYDASGVRKSAGIQAAEINKLSKKLDPKSELFLKETLGHTKIEVMVGSFLGPLVTLPGMFFLGSPLTIFDLIIN
Specific function: Unknown
COG id: COG1963
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003832 [H]
Pfam domain/function: PF02681 DUF212 [H]
EC number: NA
Molecular weight: Translated: 17229; Mature: 17098
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDFFAFFNNSVLFWSLLSCLLAQFFKILFNFFSTGEIRFGIMFETGGMPSSHSALITGA CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEC ASGIGYELGFDSSIFALAVAVALIVMYDASGVRKSAGIQAAEINKLSKKLDPKSELFLKE CCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCHHHHHHHH TLGHTKIEVMVGSFLGPLVTLPGMFFLGSPLTIFDLIIN HCCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCC >Mature Secondary Structure SDFFAFFNNSVLFWSLLSCLLAQFFKILFNFFSTGEIRFGIMFETGGMPSSHSALITGA CCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEEEEEC ASGIGYELGFDSSIFALAVAVALIVMYDASGVRKSAGIQAAEINKLSKKLDPKSELFLKE CCCCCEECCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHCCCHHHHHHHH TLGHTKIEVMVGSFLGPLVTLPGMFFLGSPLTIFDLIIN HCCCHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]