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The map label for this gene is ddpA [H]

Identifier: 123968687

GI number: 123968687

Start: 969540

End: 971111

Strand: Reverse

Name: ddpA [H]

Synonym: A9601_11541

Alternate gene names: 123968687

Gene position: 971111-969540 (Counterclockwise)

Preceding gene: 123968688

Following gene: 123968686

Centisome position: 58.15

GC content: 29.96

Gene sequence:

>1572_bases
ATGAAAAAAAAAATTGTTTTATCAATATTTATAATTTTAATTTCTTTTTTACAGAATTCTTGCGGCTCAAAAAGAATATC
TGAAAAAATCATAGTAGCAAGTTCTGGAAAAATTGAATCTTTAGATCCAGCTAGAGCAAGTACTCTTAAAGCAATTCAAT
TAATCAGTTCTCTTGGAGACACATTATATGAATTAAATTCTAACGGAGAATTAATACCTGAATTGGCCTCGGGGATGCCA
GTTATTTCAAAGGATAGACTTCAAATAACTATCAATTTAAGAAAGAATGTTTTCTTTCACGATGGAACTGCATTTAACTC
AAATGCTATGAAGTTTACCTTTGATAGATTCAAAAGAATTGGAACGATGAACTATATTTTAGGAAATAAGATTAAATCAA
TAGAAACGCCAAGTGAATATTCAGTGATAATAAATTTGAATAAACCATCAAGTTCTTTAAATGGTTTACTCACATCAGTA
AATTTAACTCCAATATCTCCTACATTTTACAAACAATATTCTGATAAGTTTCTAAATGAAAAATTTGTTGGTACTGGCAA
GTATGTGCTGACCAGTTTTTCTAATGAAGTTCAATCAATTGATCCATATTTGAATTATTGGGGTGAAAAGCCCTCAAATA
ACGGCGTTAATTTTGTGGGCTATTCAAACTCATCCTCTCTTTTTGGGGCTTTAAAAAGTAAACAAATTGACGTGCTTTTA
TCAAATTCAATTGATGATAGTCAGAGAAAAAGTTTAAATGATTTAAGCAAAAATAAACATTTTAATGAAGGTAATAGCCC
TTTCACTGAATTAAGTTTTATAAGCCTCAAAACTAGTTCTTATCCCTTAAGTAATTTTAATTTAAGATTGGCTTTAGCAA
AAAGTCTTAATAGAAAATTGATTAGTGAGAAAGTAAGTTATGGATTAAGGAAGCCATCTAGATCAATTATTCCTCCGATA
TTAAAAAAAGATAATCAAGAACTGTGGCCTAAATATGATTATTTAGAAGCGAGAAGGTTATTGCAAAAAGAAAATTATTG
CAATGGAAATATTCTAAAAATACCCCTTACTTATAGATCGAACGTGCCAGCTGACAAGCTTATTGCTCTGACATGGCAAG
AAGAAATTAAAAATTCTTTGAAAGATTGTATTGATATTGAACTCAATGGGGTTGAATCTACAACAGTTTATAAGAATCTA
AGTTTAGGAATTTATACGGCAGTTCTTCTCGATTGGACTGGGGCTTATTCAGATCCAGAGGCTTATCTTACCCCTCTTTT
AAGTTGTAATAAAATAGTTGACGGCATATGTAAAAAAGGAGAATCAGTTTACAGCGGTAGTTTTTGGGGATCTAAGAAAG
TGGAAAGTTTATTTCTTGAAAGTGAAAAAATAAGTGGAATTAAAAGATTAGAAAAACTTGTTGAAATTGAAAAAATAGCA
GCAAGTTCAATACCATATATTCCTATTTGGATCTCCTCTCAAAAAGCATGGTCACAAAATAAAATATCAAAACCTATTTT
TAATGGTGCAGGAATAATCTCATTGAGTGATCTTGAGTTAATTAATGAGTAG

Upstream 100 bases:

>100_bases
CTTGTAATTCTAAAAAAACGTTTGCTTTAGAAATTAGTCAAATAACCTTACAAATTTTCTGCTCAAATAATTCTTCAGAA
TAATCAAGAACTAAGGAAAT

Downstream 100 bases:

>100_bases
AAATTTAGATAAACTACTAAATTATTCCTTATTGAAAATTTCATTAATACCGATAATGTTATGGATAATTTCTTCATTAG
TTTTTATTTTATTAAGAATT

Product: ABC transporter substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MKKKIVLSIFIILISFLQNSCGSKRISEKIIVASSGKIESLDPARASTLKAIQLISSLGDTLYELNSNGELIPELASGMP
VISKDRLQITINLRKNVFFHDGTAFNSNAMKFTFDRFKRIGTMNYILGNKIKSIETPSEYSVIINLNKPSSSLNGLLTSV
NLTPISPTFYKQYSDKFLNEKFVGTGKYVLTSFSNEVQSIDPYLNYWGEKPSNNGVNFVGYSNSSSLFGALKSKQIDVLL
SNSIDDSQRKSLNDLSKNKHFNEGNSPFTELSFISLKTSSYPLSNFNLRLALAKSLNRKLISEKVSYGLRKPSRSIIPPI
LKKDNQELWPKYDYLEARRLLQKENYCNGNILKIPLTYRSNVPADKLIALTWQEEIKNSLKDCIDIELNGVESTTVYKNL
SLGIYTAVLLDWTGAYSDPEAYLTPLLSCNKIVDGICKKGESVYSGSFWGSKKVESLFLESEKISGIKRLEKLVEIEKIA
ASSIPYIPIWISSQKAWSQNKISKPIFNGAGIISLSDLELINE

Sequences:

>Translated_523_residues
MKKKIVLSIFIILISFLQNSCGSKRISEKIIVASSGKIESLDPARASTLKAIQLISSLGDTLYELNSNGELIPELASGMP
VISKDRLQITINLRKNVFFHDGTAFNSNAMKFTFDRFKRIGTMNYILGNKIKSIETPSEYSVIINLNKPSSSLNGLLTSV
NLTPISPTFYKQYSDKFLNEKFVGTGKYVLTSFSNEVQSIDPYLNYWGEKPSNNGVNFVGYSNSSSLFGALKSKQIDVLL
SNSIDDSQRKSLNDLSKNKHFNEGNSPFTELSFISLKTSSYPLSNFNLRLALAKSLNRKLISEKVSYGLRKPSRSIIPPI
LKKDNQELWPKYDYLEARRLLQKENYCNGNILKIPLTYRSNVPADKLIALTWQEEIKNSLKDCIDIELNGVESTTVYKNL
SLGIYTAVLLDWTGAYSDPEAYLTPLLSCNKIVDGICKKGESVYSGSFWGSKKVESLFLESEKISGIKRLEKLVEIEKIA
ASSIPYIPIWISSQKAWSQNKISKPIFNGAGIISLSDLELINE
>Mature_523_residues
MKKKIVLSIFIILISFLQNSCGSKRISEKIIVASSGKIESLDPARASTLKAIQLISSLGDTLYELNSNGELIPELASGMP
VISKDRLQITINLRKNVFFHDGTAFNSNAMKFTFDRFKRIGTMNYILGNKIKSIETPSEYSVIINLNKPSSSLNGLLTSV
NLTPISPTFYKQYSDKFLNEKFVGTGKYVLTSFSNEVQSIDPYLNYWGEKPSNNGVNFVGYSNSSSLFGALKSKQIDVLL
SNSIDDSQRKSLNDLSKNKHFNEGNSPFTELSFISLKTSSYPLSNFNLRLALAKSLNRKLISEKVSYGLRKPSRSIIPPI
LKKDNQELWPKYDYLEARRLLQKENYCNGNILKIPLTYRSNVPADKLIALTWQEEIKNSLKDCIDIELNGVESTTVYKNL
SLGIYTAVLLDWTGAYSDPEAYLTPLLSCNKIVDGICKKGESVYSGSFWGSKKVESLFLESEKISGIKRLEKLVEIEKIA
ASSIPYIPIWISSQKAWSQNKISKPIFNGAGIISLSDLELINE

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]

COG id: COG0747

COG function: function code E; ABC-type dipeptide transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 5 family [H]

Homologues:

Organism=Escherichia coli, GI1787052, Length=484, Percent_Identity=22.1074380165289, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1789887, Length=395, Percent_Identity=24.3037974683544, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI87081878, Length=472, Percent_Identity=22.8813559322034, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789966, Length=392, Percent_Identity=22.9591836734694, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1787762, Length=357, Percent_Identity=24.0896358543417, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI1787551, Length=490, Percent_Identity=21.2244897959184, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000914 [H]

Pfam domain/function: PF00496 SBP_bac_5 [H]

EC number: NA

Molecular weight: Translated: 58539; Mature: 58539

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKIVLSIFIILISFLQNSCGSKRISEKIIVASSGKIESLDPARASTLKAIQLISSLGD
CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
TLYELNSNGELIPELASGMPVISKDRLQITINLRKNVFFHDGTAFNSNAMKFTFDRFKRI
HHEEECCCCCCHHHHHCCCCEEECCCEEEEEEEECCEEEECCCEECCCCEEEEHHHHHHH
GTMNYILGNKIKSIETPSEYSVIINLNKPSSSLNGLLTSVNLTPISPTFYKQYSDKFLNE
CCHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC
KFVGTGKYVLTSFSNEVQSIDPYLNYWGEKPSNNGVNFVGYSNSSSLFGALKSKQIDVLL
CCCCCCCHHEEHHHHHHHHCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHCCCEEEEE
SNSIDDSQRKSLNDLSKNKHFNEGNSPFTELSFISLKTSSYPLSNFNLRLALAKSLNRKL
ECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEHHHHHHHHHH
ISEKVSYGLRKPSRSIIPPILKKDNQELWPKYDYLEARRLLQKENYCNGNILKIPLTYRS
HHHHHHHHCCCCCCCCCCHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECC
NVPADKLIALTWQEEIKNSLKDCIDIELNGVESTTVYKNLSLGIYTAVLLDWTGAYSDPE
CCCHHHEEEEEEHHHHHHHHHHHEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCH
AYLTPLLSCNKIVDGICKKGESVYSGSFWGSKKVESLFLESEKISGIKRLEKLVEIEKIA
HHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSIPYIPIWISSQKAWSQNKISKPIFNGAGIISLSDLELINE
HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHCC
>Mature Secondary Structure
MKKKIVLSIFIILISFLQNSCGSKRISEKIIVASSGKIESLDPARASTLKAIQLISSLGD
CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH
TLYELNSNGELIPELASGMPVISKDRLQITINLRKNVFFHDGTAFNSNAMKFTFDRFKRI
HHEEECCCCCCHHHHHCCCCEEECCCEEEEEEEECCEEEECCCEECCCCEEEEHHHHHHH
GTMNYILGNKIKSIETPSEYSVIINLNKPSSSLNGLLTSVNLTPISPTFYKQYSDKFLNE
CCHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCC
KFVGTGKYVLTSFSNEVQSIDPYLNYWGEKPSNNGVNFVGYSNSSSLFGALKSKQIDVLL
CCCCCCCHHEEHHHHHHHHCCHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHCCCEEEEE
SNSIDDSQRKSLNDLSKNKHFNEGNSPFTELSFISLKTSSYPLSNFNLRLALAKSLNRKL
ECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEHHHHHHHHHH
ISEKVSYGLRKPSRSIIPPILKKDNQELWPKYDYLEARRLLQKENYCNGNILKIPLTYRS
HHHHHHHHCCCCCCCCCCHHHCCCCHHHCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECC
NVPADKLIALTWQEEIKNSLKDCIDIELNGVESTTVYKNLSLGIYTAVLLDWTGAYSDPE
CCCHHHEEEEEEHHHHHHHHHHHEEEEECCCCCEEEEECCCHHHHHHHHHHCCCCCCCCH
AYLTPLLSCNKIVDGICKKGESVYSGSFWGSKKVESLFLESEKISGIKRLEKLVEIEKIA
HHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASSIPYIPIWISSQKAWSQNKISKPIFNGAGIISLSDLELINE
HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEECCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA