| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968676
Identifier: 123968676
GI number: 123968676
Start: 960842
End: 961783
Strand: Direct
Name: 123968676
Synonym: A9601_11431
Alternate gene names: NA
Gene position: 960842-961783 (Clockwise)
Preceding gene: 123968675
Following gene: 123968677
Centisome position: 57.54
GC content: 33.97
Gene sequence:
>942_bases ATGCTTTTAAGTCGTGTAGCAGAATCTCTTTATTGGATCAATCGTTATTTAGAACGTGCGGAAAACATATCTCGTTTCGT GGAAGTAAGCGAAGCAATGTCATTAGATTGTCCGCCAGGAAGTGCAGAACCCTGGCTACCGTTAATTGACGCTTCTAGTG ACAGAGAATCTTTTGATAAAAGATTCCCAGAGAAAAAACCTGATGACGTTATTAATTTTTTAATAAGAGATCGTTTAAAC CCAAACAGTATAATTTCTTGCATTCAAATGGCAAGAGAAAATGCACGACAAATCAGAGATGTTATGACCACAGAAATGTG GGAACAAATTAATATTTTATATTGGAATATGCAAGAAGGAGAAGCAATATGGAATAAACCAAGACAAGAACAATTAAGCG AAATAAGGAGAGAATGTCAGCTTTTTTATGGAATTACAGATGCGACTCTAAGCAAAGATCTTGCCTGGAGATTCAGCATT CTTGGAAGATTAATCGAAAGAGCTGACAAAACATCAAGAATTTTAGATGTTAAATATTATTTACTCTTACCCAGCTTAGA TGAACTTGGAGGAGTTCTTGATGAACTGCAATGGATTGCACTTTTACGTTCAGCTGGAGCTTATCAAATGTTTAGGAAAG CAGTGCAAAATTCTATAAAGCCGAATTCAGTTGCGAGATTTCTTTTACTTGATCCAATTTTCCCTAGATCAGTAAGATAC TGTCTTGATGGGATAAGCAATACTCTTAAATCAATAGATAACTCTCCAAGTACTGAAAATCCTTCAGAATTAGAATGCAT GAGAGGTTTGCTTAAAGCAAAGTGGAGTTATATCAGAATTGAAGATATAATCAATGATGGTTTACATGAGGCGATTGATT CATTGCAAATGGATTTAAATAAATTAAATGATCTCATTCAAGAAAAATATTTTATTAATTAA
Upstream 100 bases:
>100_bases CCAGGCGGGCTAACGAGGGTAGCATTAAAAAAAGGATCATTAGTCGTCAATTCTTCTCAAGGTGGAGGATGCAAAGATAC ATGGGTTGTAGGTAAATAAT
Downstream 100 bases:
>100_bases AAAGTTTATTAATGAGAATTAAATACATTCACAAACTTGAATATAAATACGAAGACCCTGTTCAATTAGGCGAGCATAGA TTATGTATAAAGCCAAGGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MLLSRVAESLYWINRYLERAENISRFVEVSEAMSLDCPPGSAEPWLPLIDASSDRESFDKRFPEKKPDDVINFLIRDRLN PNSIISCIQMARENARQIRDVMTTEMWEQINILYWNMQEGEAIWNKPRQEQLSEIRRECQLFYGITDATLSKDLAWRFSI LGRLIERADKTSRILDVKYYLLLPSLDELGGVLDELQWIALLRSAGAYQMFRKAVQNSIKPNSVARFLLLDPIFPRSVRY CLDGISNTLKSIDNSPSTENPSELECMRGLLKAKWSYIRIEDIINDGLHEAIDSLQMDLNKLNDLIQEKYFIN
Sequences:
>Translated_313_residues MLLSRVAESLYWINRYLERAENISRFVEVSEAMSLDCPPGSAEPWLPLIDASSDRESFDKRFPEKKPDDVINFLIRDRLN PNSIISCIQMARENARQIRDVMTTEMWEQINILYWNMQEGEAIWNKPRQEQLSEIRRECQLFYGITDATLSKDLAWRFSI LGRLIERADKTSRILDVKYYLLLPSLDELGGVLDELQWIALLRSAGAYQMFRKAVQNSIKPNSVARFLLLDPIFPRSVRY CLDGISNTLKSIDNSPSTENPSELECMRGLLKAKWSYIRIEDIINDGLHEAIDSLQMDLNKLNDLIQEKYFIN >Mature_313_residues MLLSRVAESLYWINRYLERAENISRFVEVSEAMSLDCPPGSAEPWLPLIDASSDRESFDKRFPEKKPDDVINFLIRDRLN PNSIISCIQMARENARQIRDVMTTEMWEQINILYWNMQEGEAIWNKPRQEQLSEIRRECQLFYGITDATLSKDLAWRFSI LGRLIERADKTSRILDVKYYLLLPSLDELGGVLDELQWIALLRSAGAYQMFRKAVQNSIKPNSVARFLLLDPIFPRSVRY CLDGISNTLKSIDNSPSTENPSELECMRGLLKAKWSYIRIEDIINDGLHEAIDSLQMDLNKLNDLIQEKYFIN
Specific function: Unknown
COG id: COG2307
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36450; Mature: 36450
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSRVAESLYWINRYLERAENISRFVEVSEAMSLDCPPGSAEPWLPLIDASSDRESFDK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHH RFPEKKPDDVINFLIRDRLNPNSIISCIQMARENARQIRDVMTTEMWEQINILYWNMQEG HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC EAIWNKPRQEQLSEIRRECQLFYGITDATLSKDLAWRFSILGRLIERADKTSRILDVKYY HHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLPSLDELGGVLDELQWIALLRSAGAYQMFRKAVQNSIKPNSVARFLLLDPIFPRSVRY HHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHH CLDGISNTLKSIDNSPSTENPSELECMRGLLKAKWSYIRIEDIINDGLHEAIDSLQMDLN HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLNDLIQEKYFIN HHHHHHHHHHCCC >Mature Secondary Structure MLLSRVAESLYWINRYLERAENISRFVEVSEAMSLDCPPGSAEPWLPLIDASSDRESFDK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCHHHHHH RFPEKKPDDVINFLIRDRLNPNSIISCIQMARENARQIRDVMTTEMWEQINILYWNMQEG HCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC EAIWNKPRQEQLSEIRRECQLFYGITDATLSKDLAWRFSILGRLIERADKTSRILDVKYY HHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLPSLDELGGVLDELQWIALLRSAGAYQMFRKAVQNSIKPNSVARFLLLDPIFPRSVRY HHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHH CLDGISNTLKSIDNSPSTENPSELECMRGLLKAKWSYIRIEDIINDGLHEAIDSLQMDLN HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLNDLIQEKYFIN HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA