| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968677
Identifier: 123968677
GI number: 123968677
Start: 961795
End: 962652
Strand: Direct
Name: 123968677
Synonym: A9601_11441
Alternate gene names: NA
Gene position: 961795-962652 (Clockwise)
Preceding gene: 123968676
Following gene: 123968678
Centisome position: 57.6
GC content: 34.62
Gene sequence:
>858_bases ATGAGAATTAAATACATTCACAAACTTGAATATAAATACGAAGACCCTGTTCAATTAGGCGAGCATAGATTATGTATAAA GCCAAGGTCAAATGGATTCCAAAAGCTAAAGAATTTTGAATTAAAAATAACCCCAGAACCAGAAATTATTTATCCATTAC TTGCGGCCAGCGGGGAAGAGATTAATAGAATCAGATTTAATGGATTAACAGATAATTTAATTATTGAATCAGTCAGTGAA GTTGAAACTATTAAACATCCAAACATTATTGATGGAGTTAAAAATAGAGATTTAACATTACCTTTTTGTAGAAGCATTAT TAACAGAGATTTACAGGGAGCATTAGAGGGATGGATGCCAAATGGACAACACGATCCCTCTGCAGTAGAACTTGCTCAAG AAGCCTTAGCAGGAAGCATTAATAACGCATTATCATTTACCTACCAACTAATAGAGATTATTCAAGATCGGGTTAAATAT ACCAAAAGACATACTGGTCCAGCATGGCCGGCTAGCAGAACACTTAGAGAACGTATAGGTTCATGCAGAGATTTAGCAAT GCTTATGGTTGAAGCTTGCAGGTCTATAGGTATCCCAAGTAGGTTTGTAAGTGGTTATCATTTTGAAGATCCGTTACCCT CTGAGTTGGATTTACACGCTTGGGCTGAATTATATATTCCAGGCGCTGGTTGGAGAGGTTTTGATCCAAGCGGAAAAGGA TTAATAGATGATAGATATTTAACATTGGTATCCTCTTCAAAATCTAATTTAACCTCTGTAATTACAGGAAACTTTATAGG AAAAAATAATTTAGAAAATACTTTATCCTGGGAAATCAAACCTCTTGAAATTAAATAA
Upstream 100 bases:
>100_bases ATGATGGTTTACATGAGGCGATTGATTCATTGCAAATGGATTTAAATAAATTAAATGATCTCATTCAAGAAAAATATTTT ATTAATTAAAAAGTTTATTA
Downstream 100 bases:
>100_bases ACACTAAATTTTTAATCTTTTAAAATAACAAAAAAATATAAATAATAATATGTTTCTTTTTTAGTGTTAATTGATACGTT CTTGTATATATATATCTGTT
Product: transglutaminase-like superfamily protein
Products: NA
Alternate protein names: Transglutaminase Domain-Containing Protein; Transglutaminase-Like; Transglutaminase-Like Protein; Transglutaminase-Like Superfamily Protein; Bacterial Transglutaminase Domain Family Protein; Transglutaminase Family Protein; Transglutaminase-Like Domain Protein; Bacterial Transglutaminase-Like Domain Family Protein; Transglutaminase; Transglutaminase-Like Domain-Containing Protein; Transglutaminase N-Terminal Domain Protein; Protease; Transglutaminase-Like Cysteine Protease; Cysteine Proteinase Transglutaminase-Like Superfamily; Transglutaminase-Like Family Protein; IMP Dehydrogenase; Malate Oxidoreductase; Transglutaminase N-Domain Protein; Cysteine Protease; Transglutaminase DomaiN-Containing Protein; Transglutaminase-Like Super Family Protein; Transglutaminase Protein; Transglutaminase/Protease-Like Protein; Transglutaminase-Like Superfamily Domain-Containing Protein; Transglutaminase-Like S Cysteineprotease; Transglutaminase-Like Superfamily Domain Protein
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MRIKYIHKLEYKYEDPVQLGEHRLCIKPRSNGFQKLKNFELKITPEPEIIYPLLAASGEEINRIRFNGLTDNLIIESVSE VETIKHPNIIDGVKNRDLTLPFCRSIINRDLQGALEGWMPNGQHDPSAVELAQEALAGSINNALSFTYQLIEIIQDRVKY TKRHTGPAWPASRTLRERIGSCRDLAMLMVEACRSIGIPSRFVSGYHFEDPLPSELDLHAWAELYIPGAGWRGFDPSGKG LIDDRYLTLVSSSKSNLTSVITGNFIGKNNLENTLSWEIKPLEIK
Sequences:
>Translated_285_residues MRIKYIHKLEYKYEDPVQLGEHRLCIKPRSNGFQKLKNFELKITPEPEIIYPLLAASGEEINRIRFNGLTDNLIIESVSE VETIKHPNIIDGVKNRDLTLPFCRSIINRDLQGALEGWMPNGQHDPSAVELAQEALAGSINNALSFTYQLIEIIQDRVKY TKRHTGPAWPASRTLRERIGSCRDLAMLMVEACRSIGIPSRFVSGYHFEDPLPSELDLHAWAELYIPGAGWRGFDPSGKG LIDDRYLTLVSSSKSNLTSVITGNFIGKNNLENTLSWEIKPLEIK >Mature_285_residues MRIKYIHKLEYKYEDPVQLGEHRLCIKPRSNGFQKLKNFELKITPEPEIIYPLLAASGEEINRIRFNGLTDNLIIESVSE VETIKHPNIIDGVKNRDLTLPFCRSIINRDLQGALEGWMPNGQHDPSAVELAQEALAGSINNALSFTYQLIEIIQDRVKY TKRHTGPAWPASRTLRERIGSCRDLAMLMVEACRSIGIPSRFVSGYHFEDPLPSELDLHAWAELYIPGAGWRGFDPSGKG LIDDRYLTLVSSSKSNLTSVITGNFIGKNNLENTLSWEIKPLEIK
Specific function: Unknown
COG id: COG1305
COG function: function code E; Transglutaminase-like enzymes, putative cysteine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32258; Mature: 32258
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIKYIHKLEYKYEDPVQLGEHRLCIKPRSNGFQKLKNFELKITPEPEIIYPLLAASGEE CCCEEEEEECCCCCCCHHHCCCEEEECCCCCCHHHHCCCEEEECCCCCEEHHHHHCCCCH INRIRFNGLTDNLIIESVSEVETIKHPNIIDGVKNRDLTLPFCRSIINRDLQGALEGWMP HCEEEECCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHCHHHHHHHHCCCC NGQHDPSAVELAQEALAGSINNALSFTYQLIEIIQDRVKYTKRHTGPAWPASRTLRERIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC SCRDLAMLMVEACRSIGIPSRFVSGYHFEDPLPSELDLHAWAELYIPGAGWRGFDPSGKG CHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCCC LIDDRYLTLVSSSKSNLTSVITGNFIGKNNLENTLSWEIKPLEIK CCCCCEEEEEECCCCCCCHHEECCCCCCCCCCCCEEEEEEEEEEC >Mature Secondary Structure MRIKYIHKLEYKYEDPVQLGEHRLCIKPRSNGFQKLKNFELKITPEPEIIYPLLAASGEE CCCEEEEEECCCCCCCHHHCCCEEEECCCCCCHHHHCCCEEEECCCCCEEHHHHHCCCCH INRIRFNGLTDNLIIESVSEVETIKHPNIIDGVKNRDLTLPFCRSIINRDLQGALEGWMP HCEEEECCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCHHHHHHHHCHHHHHHHHCCCC NGQHDPSAVELAQEALAGSINNALSFTYQLIEIIQDRVKYTKRHTGPAWPASRTLRERIG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC SCRDLAMLMVEACRSIGIPSRFVSGYHFEDPLPSELDLHAWAELYIPGAGWRGFDPSGKG CHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCCCCCC LIDDRYLTLVSSSKSNLTSVITGNFIGKNNLENTLSWEIKPLEIK CCCCCEEEEEECCCCCCCHHEECCCCCCCCCCCCEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA