| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968640
Identifier: 123968640
GI number: 123968640
Start: 942194
End: 942598
Strand: Reverse
Name: 123968640
Synonym: A9601_11071
Alternate gene names: NA
Gene position: 942598-942194 (Counterclockwise)
Preceding gene: 123968643
Following gene: 123968635
Centisome position: 56.45
GC content: 34.07
Gene sequence:
>405_bases ATGCAAGTAGCTTTTGCCTGGAGCCTTTGTCTGTCAGTTGGTGTTGTTTTATTATCAATTATTCCATTAACTATAGGGAG AGTTAAAGCAGGATATTCTGTTGAAAATATGTCTGCTCCAAGGGCTTTATTCGATGAATTACCTTCTTTTGGAAAAAGAG CAGTTTGGTGTCATCAAAATTGTTGGGAAAGTATTTCTCTACATGCACCCGCATGTCTTCTTTGTTTGATTAGTTTAACT GACTCTAATATTGCAATAATTGCAGCATTGATTCATCCTATTTTTCGATTTTTATATATTGGTGCATATATATTTAATAT CCCCACAGCTAGAGGTTTAATGTGGGCCTCAGGAATTTTTACAACACTTTTGCTTTATAAAGAGGGCTTAACTCAATTGA TATAA
Upstream 100 bases:
>100_bases AATTACAGCATTTTTTGCAAAGTTTTATCTATGGTAATGATTTTTCATTTATCACGATAACGAGCTTCAATTATTAAGCT AATAATATTATTTAAATCAT
Downstream 100 bases:
>100_bases ACTTTTTAAACAATAAATTTTTCTAAATCTTTTAATTGATATTCATTGATTAGTTCCACTTTATTTGATTTTGCTAGTTG ATGAGCAGACTTTGTAAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MQVAFAWSLCLSVGVVLLSIIPLTIGRVKAGYSVENMSAPRALFDELPSFGKRAVWCHQNCWESISLHAPACLLCLISLT DSNIAIIAALIHPIFRFLYIGAYIFNIPTARGLMWASGIFTTLLLYKEGLTQLI
Sequences:
>Translated_134_residues MQVAFAWSLCLSVGVVLLSIIPLTIGRVKAGYSVENMSAPRALFDELPSFGKRAVWCHQNCWESISLHAPACLLCLISLT DSNIAIIAALIHPIFRFLYIGAYIFNIPTARGLMWASGIFTTLLLYKEGLTQLI >Mature_134_residues MQVAFAWSLCLSVGVVLLSIIPLTIGRVKAGYSVENMSAPRALFDELPSFGKRAVWCHQNCWESISLHAPACLLCLISLT DSNIAIIAALIHPIFRFLYIGAYIFNIPTARGLMWASGIFTTLLLYKEGLTQLI
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14773; Mature: 14773
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVAFAWSLCLSVGVVLLSIIPLTIGRVKAGYSVENMSAPRALFDELPSFGKRAVWCHQN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEHHHHH CWESISLHAPACLLCLISLTDSNIAIIAALIHPIFRFLYIGAYIFNIPTARGLMWASGIF HHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TTLLLYKEGLTQLI HHHHHHHHHHHHCC >Mature Secondary Structure MQVAFAWSLCLSVGVVLLSIIPLTIGRVKAGYSVENMSAPRALFDELPSFGKRAVWCHQN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCEEHHHHH CWESISLHAPACLLCLISLTDSNIAIIAALIHPIFRFLYIGAYIFNIPTARGLMWASGIF HHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH TTLLLYKEGLTQLI HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA