Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968643

Identifier: 123968643

GI number: 123968643

Start: 943276

End: 943818

Strand: Reverse

Name: 123968643

Synonym: A9601_11101

Alternate gene names: NA

Gene position: 943818-943276 (Counterclockwise)

Preceding gene: 123968646

Following gene: 123968640

Centisome position: 56.52

GC content: 27.44

Gene sequence:

>543_bases
ATGGAAACCGAAAATGATTTATTAAATTTACTTCTTAAATCTCCAAATTCAGAGAGTATACGTAATTTTGCCGAACAACT
TGAAATTGATCATAATTTTTCCTTTACCAAAGATAGAAATGATTTGCAGGGTGTTTGGGAGCTTAGGTGGAGTAGTTCTA
ATAGCCCTTTTTTAAAATATTCTCCTTTTATTGATAACCTTCAATTTCTTGACCCCTTAAATTTAAATGGTCTTAATTTA
CTTAAACCTAGAGGAATAAAATCAATTATTGGTACTGGCATTTTAATAAGATTTAATTACATAAATGAAAAAAAAATTGG
GGTCAAATTTACACATGCCGGTGTTATTGGCCCTAAATTTGGAAGAAAAAATTTTAAGGCTATGAAAGAAATAAATAATG
AACAATTAGGGTGGTTAGAGATAACATATTTAAGCAATAAGCTTAGAATCTGTAGAGGTGATAAAGGAACTTTATTTGTT
TTAAGAAAAATAAATTCACCGACTTTATTCAATAATTTCAAGGAATTTATTAAAATCTATTAA

Upstream 100 bases:

>100_bases
AAGCCAATAGCTCTTTGTCATCAAATCAACATATTCTGGGTAGAATATAGCACATGGAGGTAAGTATTTATCCTTAGCTA
TATACTCCAACGTTTATTAA

Downstream 100 bases:

>100_bases
AAATAGAAATTAATTCTTTATCCAAATAGACTTTAATGCGAAATAAATTGGTAAATATTTAAATGATTCTTTAGGTATTT
CATAACTTAAGAATTTTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
METENDLLNLLLKSPNSESIRNFAEQLEIDHNFSFTKDRNDLQGVWELRWSSSNSPFLKYSPFIDNLQFLDPLNLNGLNL
LKPRGIKSIIGTGILIRFNYINEKKIGVKFTHAGVIGPKFGRKNFKAMKEINNEQLGWLEITYLSNKLRICRGDKGTLFV
LRKINSPTLFNNFKEFIKIY

Sequences:

>Translated_180_residues
METENDLLNLLLKSPNSESIRNFAEQLEIDHNFSFTKDRNDLQGVWELRWSSSNSPFLKYSPFIDNLQFLDPLNLNGLNL
LKPRGIKSIIGTGILIRFNYINEKKIGVKFTHAGVIGPKFGRKNFKAMKEINNEQLGWLEITYLSNKLRICRGDKGTLFV
LRKINSPTLFNNFKEFIKIY
>Mature_180_residues
METENDLLNLLLKSPNSESIRNFAEQLEIDHNFSFTKDRNDLQGVWELRWSSSNSPFLKYSPFIDNLQFLDPLNLNGLNL
LKPRGIKSIIGTGILIRFNYINEKKIGVKFTHAGVIGPKFGRKNFKAMKEINNEQLGWLEITYLSNKLRICRGDKGTLFV
LRKINSPTLFNNFKEFIKIY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20901; Mature: 20901

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METENDLLNLLLKSPNSESIRNFAEQLEIDHNFSFTKDRNDLQGVWELRWSSSNSPFLKY
CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEE
SPFIDNLQFLDPLNLNGLNLLKPRGIKSIIGTGILIRFNYINEKKIGVKFTHAGVIGPKF
CCCCCCCHHCCCCCCCCCEEECCCCHHHHHCCCEEEEEEEECCCCCCEEEEECCCCCCCC
GRKNFKAMKEINNEQLGWLEITYLSNKLRICRGDKGTLFVLRKINSPTLFNNFKEFIKIY
CCHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCC
>Mature Secondary Structure
METENDLLNLLLKSPNSESIRNFAEQLEIDHNFSFTKDRNDLQGVWELRWSSSNSPFLKY
CCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEE
SPFIDNLQFLDPLNLNGLNLLKPRGIKSIIGTGILIRFNYINEKKIGVKFTHAGVIGPKF
CCCCCCCHHCCCCCCCCCEEECCCCHHHHHCCCEEEEEEEECCCCCCEEEEECCCCCCCC
GRKNFKAMKEINNEQLGWLEITYLSNKLRICRGDKGTLFVLRKINSPTLFNNFKEFIKIY
CCHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCEEEEEEECCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA