| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968605
Identifier: 123968605
GI number: 123968605
Start: 924141
End: 924944
Strand: Reverse
Name: 123968605
Synonym: A9601_10721
Alternate gene names: NA
Gene position: 924944-924141 (Counterclockwise)
Preceding gene: 123968606
Following gene: 123968604
Centisome position: 55.39
GC content: 22.39
Gene sequence:
>804_bases ATGAACAATAATATAAGATTTGAATTATCGTTTAAAAATATTTCTCAGTTAGAAAATAAACTTAACTTCTGCAAATCTAA TAATATAAAAAATATCAATATTCCATGTAAAGGACTTATAAAGAAGGATTTATTTAATTCAACTTTTAAATATATAACAA AAAACTATAATGAATTTAATGTAACCTATCACTATAGTCTTTATCATCAATATTCAGAAAATAAAGAAATATCGTATCAG GATTTTTTAGATTTTGTTAAAAGTTCTCAGACTAATAAAAATTATCAAATTCTGCTTGTTTCGGGATCTAAAAAGAAAAA AAACTTTGACTCAGTTGATGTATTAGCTTATTTAAAAAAAGAAAAAAATTTAAAACTTAAATTAGGTATAGCTTACAATC CATATTTGAAAAAGTATTATAATATTTTTTCAGAAAGAGAAAGGTTCGAAAGAAAAATTTCGACTGGATTAATAAATTCA ATTTGGTTTCAATATGGCACAGATATTAAAGTTCTTCAGAATGAGTTGACTTATCTAAAGAAAATAGCAAAAGATCAAAA ATTAAATCTATTTGGAAGTTTATTTATTCCCTCTAAACAATTTATAGCGCGGTTTAAATTTCGTCCTTGGAAAGAGGTAT ACATATCAGAAAAGTGTTTATTTACCTTAGAAAAATTTTTTGATTTTACAAGAGATTTAGTTAGTTTTTATAAAAATAAT AATATTACTCCTGTAATTGAATCTGATTTTTCATCATCAGATAAACTTGATTCTGTTTATAGTTTTTTAGAAAATGAAAG ATAA
Upstream 100 bases:
>100_bases TTTTAAAGGCTAAGAATAAAAAGACGACTTCCAAATTAAGAATCGTAGCAGATGCTTGTTTTCGTTAATATGTTGAGTGA TTAAATATGACTACTAAATA
Downstream 100 bases:
>100_bases TTTCTGCAAATATTAAATCAATGAAAAGTGATTTTACATATGACTTATTAATAATAGGTGGAGGTATATCTGCGTGTGTT TTTGCTTCGAAGATTCTGAA
Product: amphipathic helix repeat-containing protein
Products: NA
Alternate protein names: Paired Amphipathic Helix Repeat
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MNNNIRFELSFKNISQLENKLNFCKSNNIKNINIPCKGLIKKDLFNSTFKYITKNYNEFNVTYHYSLYHQYSENKEISYQ DFLDFVKSSQTNKNYQILLVSGSKKKKNFDSVDVLAYLKKEKNLKLKLGIAYNPYLKKYYNIFSERERFERKISTGLINS IWFQYGTDIKVLQNELTYLKKIAKDQKLNLFGSLFIPSKQFIARFKFRPWKEVYISEKCLFTLEKFFDFTRDLVSFYKNN NITPVIESDFSSSDKLDSVYSFLENER
Sequences:
>Translated_267_residues MNNNIRFELSFKNISQLENKLNFCKSNNIKNINIPCKGLIKKDLFNSTFKYITKNYNEFNVTYHYSLYHQYSENKEISYQ DFLDFVKSSQTNKNYQILLVSGSKKKKNFDSVDVLAYLKKEKNLKLKLGIAYNPYLKKYYNIFSERERFERKISTGLINS IWFQYGTDIKVLQNELTYLKKIAKDQKLNLFGSLFIPSKQFIARFKFRPWKEVYISEKCLFTLEKFFDFTRDLVSFYKNN NITPVIESDFSSSDKLDSVYSFLENER >Mature_267_residues MNNNIRFELSFKNISQLENKLNFCKSNNIKNINIPCKGLIKKDLFNSTFKYITKNYNEFNVTYHYSLYHQYSENKEISYQ DFLDFVKSSQTNKNYQILLVSGSKKKKNFDSVDVLAYLKKEKNLKLKLGIAYNPYLKKYYNIFSERERFERKISTGLINS IWFQYGTDIKVLQNELTYLKKIAKDQKLNLFGSLFIPSKQFIARFKFRPWKEVYISEKCLFTLEKFFDFTRDLVSFYKNN NITPVIESDFSSSDKLDSVYSFLENER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31957; Mature: 31957
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNNIRFELSFKNISQLENKLNFCKSNNIKNINIPCKGLIKKDLFNSTFKYITKNYNEFN CCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCEEE VTYHYSLYHQYSENKEISYQDFLDFVKSSQTNKNYQILLVSGSKKKKNFDSVDVLAYLKK EEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH EKNLKLKLGIAYNPYLKKYYNIFSERERFERKISTGLINSIWFQYGTDIKVLQNELTYLK CCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KIAKDQKLNLFGSLFIPSKQFIARFKFRPWKEVYISEKCLFTLEKFFDFTRDLVSFYKNN HHHCCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NITPVIESDFSSSDKLDSVYSFLENER CCCEEECCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MNNNIRFELSFKNISQLENKLNFCKSNNIKNINIPCKGLIKKDLFNSTFKYITKNYNEFN CCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCEEE VTYHYSLYHQYSENKEISYQDFLDFVKSSQTNKNYQILLVSGSKKKKNFDSVDVLAYLKK EEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH EKNLKLKLGIAYNPYLKKYYNIFSERERFERKISTGLINSIWFQYGTDIKVLQNELTYLK CCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH KIAKDQKLNLFGSLFIPSKQFIARFKFRPWKEVYISEKCLFTLEKFFDFTRDLVSFYKNN HHHCCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NITPVIESDFSSSDKLDSVYSFLENER CCCEEECCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA