| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968604
Identifier: 123968604
GI number: 123968604
Start: 922954
End: 924120
Strand: Reverse
Name: 123968604
Synonym: A9601_10711
Alternate gene names: NA
Gene position: 924120-922954 (Counterclockwise)
Preceding gene: 123968605
Following gene: 123968602
Centisome position: 55.34
GC content: 24.59
Gene sequence:
>1167_bases ATGAAAAGTGATTTTACATATGACTTATTAATAATAGGTGGAGGTATATCTGCGTGTGTTTTTGCTTCGAAGATTCTGAA AAATAATATTACAAAAAAAGTTGCATTAATTGAAATTGGTCGTGGTCTTGGAGGGAGATCAAGTACAAGAATAAGCAAAA AATATAAAGGATGGAAACTAAACCATGGTTCTCCAAATTTCAATATATCTAACAGTAATAATAATCTCCTATTAAAAAGA TATATTGATGAATTATTGGAAAATAAATATATAAAAATTGACGACTCAGATATATTTTTTCTAAGTGAAGATTCTAATTT AGAAACCATAAAAAAATCTGAGTTTTCTTGCGGGGTCAATTATCTATCTTCAGATTCTATGAGTGAATTATCGAAAAAGA TAATTGAGTCAAATAATTTAGAAGAGAAAATTGATTATTTCTTTGAAACTTTAATAGTTGATATGAAGTTTAATCATAAG GAATGGTTACTAACATCAAATAATGGTGAAAAATTCAAGTCTAAATATTTAATTTGTTCCACTAATTTGTTATTACATAA GAGGTCTTTAAAAATATTAAACGTAAATCAAATTCCATTAAGAAAAGCTATTCCTATTAATAATGATAGAAAAATAGATT TACTATTAAATTGCTTAGAAGAACAAACATTTATTCCCAGGTTAACTTTTTTAATTTATACAAATGAAAATTATAATTTT AAGGATTATTATTCTAAAAAACAGAGGTATTTTTATTTAAAAAACAATTTAGAAAAAAAATATCGATTTGAAAGAATTAT TTTTCAGCTGCAAGATAACAATAAATTAGGAATCGTAATTCATTCAAAAAACGCAGATTTAATTAATTCTTATATAAGCG CAAAAGATGAAGAAGTTTTTAAACAAATAATAATTACAAATTTTAATAAACTGTTCAAAGAGAATTCTGTAGTACATAAA TTAAATTGTGATGAAAAAATATCTATTATGAAATGGAGAGCTTCACAGCCTTCTGGCCTTGCCGTACCATTATCTTTACA ATTTAGTAGAAAATATAGAATTGGATTTTGCGGAGACTGGTTTGAAGGATATGGATTTGGTAGAATTGAAGGATCAATTT TAAGTGCACTAATATTAGCGGAAAAAATTAAAAACTTAATTAAATAA
Upstream 100 bases:
>100_bases TTACTCCTGTAATTGAATCTGATTTTTCATCATCAGATAAACTTGATTCTGTTTATAGTTTTTTAGAAAATGAAAGATAA TTTCTGCAAATATTAAATCA
Downstream 100 bases:
>100_bases TTTTTCCAGAATTAGATCTATATCAGTGTTTTTTTCAATAATGAATTTTTTTTTATTATTTTTTATGCTATCAGGTTTGA ATTTTTCGTAATAAATGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKSDFTYDLLIIGGGISACVFASKILKNNITKKVALIEIGRGLGGRSSTRISKKYKGWKLNHGSPNFNISNSNNNLLLKR YIDELLENKYIKIDDSDIFFLSEDSNLETIKKSEFSCGVNYLSSDSMSELSKKIIESNNLEEKIDYFFETLIVDMKFNHK EWLLTSNNGEKFKSKYLICSTNLLLHKRSLKILNVNQIPLRKAIPINNDRKIDLLLNCLEEQTFIPRLTFLIYTNENYNF KDYYSKKQRYFYLKNNLEKKYRFERIIFQLQDNNKLGIVIHSKNADLINSYISAKDEEVFKQIIITNFNKLFKENSVVHK LNCDEKISIMKWRASQPSGLAVPLSLQFSRKYRIGFCGDWFEGYGFGRIEGSILSALILAEKIKNLIK
Sequences:
>Translated_388_residues MKSDFTYDLLIIGGGISACVFASKILKNNITKKVALIEIGRGLGGRSSTRISKKYKGWKLNHGSPNFNISNSNNNLLLKR YIDELLENKYIKIDDSDIFFLSEDSNLETIKKSEFSCGVNYLSSDSMSELSKKIIESNNLEEKIDYFFETLIVDMKFNHK EWLLTSNNGEKFKSKYLICSTNLLLHKRSLKILNVNQIPLRKAIPINNDRKIDLLLNCLEEQTFIPRLTFLIYTNENYNF KDYYSKKQRYFYLKNNLEKKYRFERIIFQLQDNNKLGIVIHSKNADLINSYISAKDEEVFKQIIITNFNKLFKENSVVHK LNCDEKISIMKWRASQPSGLAVPLSLQFSRKYRIGFCGDWFEGYGFGRIEGSILSALILAEKIKNLIK >Mature_388_residues MKSDFTYDLLIIGGGISACVFASKILKNNITKKVALIEIGRGLGGRSSTRISKKYKGWKLNHGSPNFNISNSNNNLLLKR YIDELLENKYIKIDDSDIFFLSEDSNLETIKKSEFSCGVNYLSSDSMSELSKKIIESNNLEEKIDYFFETLIVDMKFNHK EWLLTSNNGEKFKSKYLICSTNLLLHKRSLKILNVNQIPLRKAIPINNDRKIDLLLNCLEEQTFIPRLTFLIYTNENYNF KDYYSKKQRYFYLKNNLEKKYRFERIIFQLQDNNKLGIVIHSKNADLINSYISAKDEEVFKQIIITNFNKLFKENSVVHK LNCDEKISIMKWRASQPSGLAVPLSLQFSRKYRIGFCGDWFEGYGFGRIEGSILSALILAEKIKNLIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45096; Mature: 45096
Theoretical pI: Translated: 9.83; Mature: 9.83
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSDFTYDLLIIGGGISACVFASKILKNNITKKVALIEIGRGLGGRSSTRISKKYKGWKL CCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCHHHHHCCCEEE NHGSPNFNISNSNNNLLLKRYIDELLENKYIKIDDSDIFFLSEDSNLETIKKSEFSCGVN CCCCCCEEEECCCCCEEHHHHHHHHHCCCEEEECCCEEEEEECCCCCHHHHHCCHHCCCC YLSSDSMSELSKKIIESNNLEEKIDYFFETLIVDMKFNHKEWLLTSNNGEKFKSKYLICS CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCHHCEEEEEE TNLLLHKRSLKILNVNQIPLRKAIPINNDRKIDLLLNCLEEQTFIPRLTFLIYTNENYNF CCEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCH KDYYSKKQRYFYLKNNLEKKYRFERIIFQLQDNNKLGIVIHSKNADLINSYISAKDEEVF HHHHCCCCEEEEECCCCHHHHHEEEEEEEEECCCEEEEEEECCCCHHHHHHHCCCHHHHH KQIIITNFNKLFKENSVVHKLNCDEKISIMKWRASQPSGLAVPLSLQFSRKYRIGFCGDW HHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCEEEEEEEEECCEEEEEEEECH FEGYGFGRIEGSILSALILAEKIKNLIK HHCCCCCEECHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSDFTYDLLIIGGGISACVFASKILKNNITKKVALIEIGRGLGGRSSTRISKKYKGWKL CCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCHHHHHCCCEEE NHGSPNFNISNSNNNLLLKRYIDELLENKYIKIDDSDIFFLSEDSNLETIKKSEFSCGVN CCCCCCEEEECCCCCEEHHHHHHHHHCCCEEEECCCEEEEEECCCCCHHHHHCCHHCCCC YLSSDSMSELSKKIIESNNLEEKIDYFFETLIVDMKFNHKEWLLTSNNGEKFKSKYLICS CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCHHCEEEEEE TNLLLHKRSLKILNVNQIPLRKAIPINNDRKIDLLLNCLEEQTFIPRLTFLIYTNENYNF CCEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCH KDYYSKKQRYFYLKNNLEKKYRFERIIFQLQDNNKLGIVIHSKNADLINSYISAKDEEVF HHHHCCCCEEEEECCCCHHHHHEEEEEEEEECCCEEEEEEECCCCHHHHHHHCCCHHHHH KQIIITNFNKLFKENSVVHKLNCDEKISIMKWRASQPSGLAVPLSLQFSRKYRIGFCGDW HHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCEEEEEEEEECCEEEEEEEECH FEGYGFGRIEGSILSALILAEKIKNLIK HHCCCCCEECHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA