Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968604

Identifier: 123968604

GI number: 123968604

Start: 922954

End: 924120

Strand: Reverse

Name: 123968604

Synonym: A9601_10711

Alternate gene names: NA

Gene position: 924120-922954 (Counterclockwise)

Preceding gene: 123968605

Following gene: 123968602

Centisome position: 55.34

GC content: 24.59

Gene sequence:

>1167_bases
ATGAAAAGTGATTTTACATATGACTTATTAATAATAGGTGGAGGTATATCTGCGTGTGTTTTTGCTTCGAAGATTCTGAA
AAATAATATTACAAAAAAAGTTGCATTAATTGAAATTGGTCGTGGTCTTGGAGGGAGATCAAGTACAAGAATAAGCAAAA
AATATAAAGGATGGAAACTAAACCATGGTTCTCCAAATTTCAATATATCTAACAGTAATAATAATCTCCTATTAAAAAGA
TATATTGATGAATTATTGGAAAATAAATATATAAAAATTGACGACTCAGATATATTTTTTCTAAGTGAAGATTCTAATTT
AGAAACCATAAAAAAATCTGAGTTTTCTTGCGGGGTCAATTATCTATCTTCAGATTCTATGAGTGAATTATCGAAAAAGA
TAATTGAGTCAAATAATTTAGAAGAGAAAATTGATTATTTCTTTGAAACTTTAATAGTTGATATGAAGTTTAATCATAAG
GAATGGTTACTAACATCAAATAATGGTGAAAAATTCAAGTCTAAATATTTAATTTGTTCCACTAATTTGTTATTACATAA
GAGGTCTTTAAAAATATTAAACGTAAATCAAATTCCATTAAGAAAAGCTATTCCTATTAATAATGATAGAAAAATAGATT
TACTATTAAATTGCTTAGAAGAACAAACATTTATTCCCAGGTTAACTTTTTTAATTTATACAAATGAAAATTATAATTTT
AAGGATTATTATTCTAAAAAACAGAGGTATTTTTATTTAAAAAACAATTTAGAAAAAAAATATCGATTTGAAAGAATTAT
TTTTCAGCTGCAAGATAACAATAAATTAGGAATCGTAATTCATTCAAAAAACGCAGATTTAATTAATTCTTATATAAGCG
CAAAAGATGAAGAAGTTTTTAAACAAATAATAATTACAAATTTTAATAAACTGTTCAAAGAGAATTCTGTAGTACATAAA
TTAAATTGTGATGAAAAAATATCTATTATGAAATGGAGAGCTTCACAGCCTTCTGGCCTTGCCGTACCATTATCTTTACA
ATTTAGTAGAAAATATAGAATTGGATTTTGCGGAGACTGGTTTGAAGGATATGGATTTGGTAGAATTGAAGGATCAATTT
TAAGTGCACTAATATTAGCGGAAAAAATTAAAAACTTAATTAAATAA

Upstream 100 bases:

>100_bases
TTACTCCTGTAATTGAATCTGATTTTTCATCATCAGATAAACTTGATTCTGTTTATAGTTTTTTAGAAAATGAAAGATAA
TTTCTGCAAATATTAAATCA

Downstream 100 bases:

>100_bases
TTTTTCCAGAATTAGATCTATATCAGTGTTTTTTTCAATAATGAATTTTTTTTTATTATTTTTTATGCTATCAGGTTTGA
ATTTTTCGTAATAAATGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKSDFTYDLLIIGGGISACVFASKILKNNITKKVALIEIGRGLGGRSSTRISKKYKGWKLNHGSPNFNISNSNNNLLLKR
YIDELLENKYIKIDDSDIFFLSEDSNLETIKKSEFSCGVNYLSSDSMSELSKKIIESNNLEEKIDYFFETLIVDMKFNHK
EWLLTSNNGEKFKSKYLICSTNLLLHKRSLKILNVNQIPLRKAIPINNDRKIDLLLNCLEEQTFIPRLTFLIYTNENYNF
KDYYSKKQRYFYLKNNLEKKYRFERIIFQLQDNNKLGIVIHSKNADLINSYISAKDEEVFKQIIITNFNKLFKENSVVHK
LNCDEKISIMKWRASQPSGLAVPLSLQFSRKYRIGFCGDWFEGYGFGRIEGSILSALILAEKIKNLIK

Sequences:

>Translated_388_residues
MKSDFTYDLLIIGGGISACVFASKILKNNITKKVALIEIGRGLGGRSSTRISKKYKGWKLNHGSPNFNISNSNNNLLLKR
YIDELLENKYIKIDDSDIFFLSEDSNLETIKKSEFSCGVNYLSSDSMSELSKKIIESNNLEEKIDYFFETLIVDMKFNHK
EWLLTSNNGEKFKSKYLICSTNLLLHKRSLKILNVNQIPLRKAIPINNDRKIDLLLNCLEEQTFIPRLTFLIYTNENYNF
KDYYSKKQRYFYLKNNLEKKYRFERIIFQLQDNNKLGIVIHSKNADLINSYISAKDEEVFKQIIITNFNKLFKENSVVHK
LNCDEKISIMKWRASQPSGLAVPLSLQFSRKYRIGFCGDWFEGYGFGRIEGSILSALILAEKIKNLIK
>Mature_388_residues
MKSDFTYDLLIIGGGISACVFASKILKNNITKKVALIEIGRGLGGRSSTRISKKYKGWKLNHGSPNFNISNSNNNLLLKR
YIDELLENKYIKIDDSDIFFLSEDSNLETIKKSEFSCGVNYLSSDSMSELSKKIIESNNLEEKIDYFFETLIVDMKFNHK
EWLLTSNNGEKFKSKYLICSTNLLLHKRSLKILNVNQIPLRKAIPINNDRKIDLLLNCLEEQTFIPRLTFLIYTNENYNF
KDYYSKKQRYFYLKNNLEKKYRFERIIFQLQDNNKLGIVIHSKNADLINSYISAKDEEVFKQIIITNFNKLFKENSVVHK
LNCDEKISIMKWRASQPSGLAVPLSLQFSRKYRIGFCGDWFEGYGFGRIEGSILSALILAEKIKNLIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45096; Mature: 45096

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSDFTYDLLIIGGGISACVFASKILKNNITKKVALIEIGRGLGGRSSTRISKKYKGWKL
CCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCHHHHHCCCEEE
NHGSPNFNISNSNNNLLLKRYIDELLENKYIKIDDSDIFFLSEDSNLETIKKSEFSCGVN
CCCCCCEEEECCCCCEEHHHHHHHHHCCCEEEECCCEEEEEECCCCCHHHHHCCHHCCCC
YLSSDSMSELSKKIIESNNLEEKIDYFFETLIVDMKFNHKEWLLTSNNGEKFKSKYLICS
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCHHCEEEEEE
TNLLLHKRSLKILNVNQIPLRKAIPINNDRKIDLLLNCLEEQTFIPRLTFLIYTNENYNF
CCEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCH
KDYYSKKQRYFYLKNNLEKKYRFERIIFQLQDNNKLGIVIHSKNADLINSYISAKDEEVF
HHHHCCCCEEEEECCCCHHHHHEEEEEEEEECCCEEEEEEECCCCHHHHHHHCCCHHHHH
KQIIITNFNKLFKENSVVHKLNCDEKISIMKWRASQPSGLAVPLSLQFSRKYRIGFCGDW
HHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCEEEEEEEEECCEEEEEEEECH
FEGYGFGRIEGSILSALILAEKIKNLIK
HHCCCCCEECHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSDFTYDLLIIGGGISACVFASKILKNNITKKVALIEIGRGLGGRSSTRISKKYKGWKL
CCCCCEEEEEEECCCHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCHHHHHCCCEEE
NHGSPNFNISNSNNNLLLKRYIDELLENKYIKIDDSDIFFLSEDSNLETIKKSEFSCGVN
CCCCCCEEEECCCCCEEHHHHHHHHHCCCEEEECCCEEEEEECCCCCHHHHHCCHHCCCC
YLSSDSMSELSKKIIESNNLEEKIDYFFETLIVDMKFNHKEWLLTSNNGEKFKSKYLICS
CCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEEEEECCCEEEEECCCCCCHHCEEEEEE
TNLLLHKRSLKILNVNQIPLRKAIPINNDRKIDLLLNCLEEQTFIPRLTFLIYTNENYNF
CCEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEEEECCCCCH
KDYYSKKQRYFYLKNNLEKKYRFERIIFQLQDNNKLGIVIHSKNADLINSYISAKDEEVF
HHHHCCCCEEEEECCCCHHHHHEEEEEEEEECCCEEEEEEECCCCHHHHHHHCCCHHHHH
KQIIITNFNKLFKENSVVHKLNCDEKISIMKWRASQPSGLAVPLSLQFSRKYRIGFCGDW
HHHHHHHHHHHHHCCCEEEEECCCCCEEEEEEECCCCCCEEEEEEEEECCEEEEEEEECH
FEGYGFGRIEGSILSALILAEKIKNLIK
HHCCCCCEECHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA