| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968553
Identifier: 123968553
GI number: 123968553
Start: 880352
End: 880678
Strand: Direct
Name: 123968553
Synonym: A9601_10201
Alternate gene names: NA
Gene position: 880352-880678 (Clockwise)
Preceding gene: 123968552
Following gene: 123968554
Centisome position: 52.72
GC content: 27.22
Gene sequence:
>327_bases ATGAATAGTAAATTAGAAAAAAAAGAAAACAATTTAGAAAAAAGTTTTTTTTCAATATTTATAACGACTTTTACAACAAT TTTTATTGCTGAACTTGGGGATAAAACTCAGATAGCCACATTAATGCTTTCTGCTGAATCGGGCAAGCCAATAGTTGTTT TTTTTGGGAGTTCTCTAGCATTAATAAGCTCCAGCATAGTAGGAGTTCTTATTGGTAAATGGGTATCAAAAAAAATATCT CCTAGCAAATTTGCTTTATCTACTGGTACTTTAATGATATTGATAAGTATATTTTTAGCTTATGAAACATTCAAAAATTA TTTATAA
Upstream 100 bases:
>100_bases GTGATAAATTTTTAATAGATTGCTGCAAACAACATATTTCATCAAATTATGGATACCAAAGTAAAGAGATGAAAACTTTT AGAATTGCTGTTTCAGGAAA
Downstream 100 bases:
>100_bases ATGGTTTTAAGTTTATTACTATCAACATTTTTTACCGTTTTCATAGCTGAATTAGGTGACAAAACTCAACTAGCTACTCT AACTATAAGTGGCACTTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MNSKLEKKENNLEKSFFSIFITTFTTIFIAELGDKTQIATLMLSAESGKPIVVFFGSSLALISSSIVGVLIGKWVSKKIS PSKFALSTGTLMILISIFLAYETFKNYL
Sequences:
>Translated_108_residues MNSKLEKKENNLEKSFFSIFITTFTTIFIAELGDKTQIATLMLSAESGKPIVVFFGSSLALISSSIVGVLIGKWVSKKIS PSKFALSTGTLMILISIFLAYETFKNYL >Mature_108_residues MNSKLEKKENNLEKSFFSIFITTFTTIFIAELGDKTQIATLMLSAESGKPIVVFFGSSLALISSSIVGVLIGKWVSKKIS PSKFALSTGTLMILISIFLAYETFKNYL
Specific function: Unknown
COG id: COG2119
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11897; Mature: 11897
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSKLEKKENNLEKSFFSIFITTFTTIFIAELGDKTQIATLMLSAESGKPIVVFFGSSLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHEEEEECCCCCEEEEEECCCHH LISSSIVGVLIGKWVSKKISPSKFALSTGTLMILISIFLAYETFKNYL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNSKLEKKENNLEKSFFSIFITTFTTIFIAELGDKTQIATLMLSAESGKPIVVFFGSSLA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHEEEEECCCCCEEEEEECCCHH LISSSIVGVLIGKWVSKKISPSKFALSTGTLMILISIFLAYETFKNYL HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA