| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968552
Identifier: 123968552
GI number: 123968552
Start: 880008
End: 880355
Strand: Direct
Name: 123968552
Synonym: A9601_10191
Alternate gene names: NA
Gene position: 880008-880355 (Clockwise)
Preceding gene: 123968549
Following gene: 123968553
Centisome position: 52.7
GC content: 32.47
Gene sequence:
>348_bases ATGAAATCATGGACATGTATAGAAAATTGTGGAGCTTGTTGTAAATTCGACTTGAACGAAAGAAGCGATTTGGCTAACAA ACTCAACAAAGAAGATAAGGCCTTGATAAATTCTATGACGGCCAAAGACGGTTGGTGTAAAAACCTGGACAGAGAAAATA GAAAATGCTTAATTTATGAAACCAGACCACATTTTTGCCGGGTAAGTGAATTTTCTACTTCATTTAAAGGATATTTGAAA TCTGGTGATAAATTTTTAATAGATTGCTGCAAACAACATATTTCATCAAATTATGGATACCAAAGTAAAGAGATGAAAAC TTTTAGAATTGCTGTTTCAGGAAAATGA
Upstream 100 bases:
>100_bases AGGAATAAGTGTTGCCATAATTAATGAATATGTTTTGTGATACTATTTTTACAAATAAATGTCGAAACTGTACTAATACG TTACAAGATTGAATTAAATC
Downstream 100 bases:
>100_bases ATAGTAAATTAGAAAAAAAAGAAAACAATTTAGAAAAAAGTTTTTTTTCAATATTTATAACGACTTTTACAACAATTTTT ATTGCTGAACTTGGGGATAA
Product: Fe-S-cluster oxidoreductase
Products: NA
Alternate protein names: Fe-S-Cluster Oxidoreductase; Fe-S-Cluster Oxidoreductase-Like
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MKSWTCIENCGACCKFDLNERSDLANKLNKEDKALINSMTAKDGWCKNLDRENRKCLIYETRPHFCRVSEFSTSFKGYLK SGDKFLIDCCKQHISSNYGYQSKEMKTFRIAVSGK
Sequences:
>Translated_115_residues MKSWTCIENCGACCKFDLNERSDLANKLNKEDKALINSMTAKDGWCKNLDRENRKCLIYETRPHFCRVSEFSTSFKGYLK SGDKFLIDCCKQHISSNYGYQSKEMKTFRIAVSGK >Mature_115_residues MKSWTCIENCGACCKFDLNERSDLANKLNKEDKALINSMTAKDGWCKNLDRENRKCLIYETRPHFCRVSEFSTSFKGYLK SGDKFLIDCCKQHISSNYGYQSKEMKTFRIAVSGK
Specific function: Unknown
COG id: COG0727
COG function: function code R; Predicted Fe-S-cluster oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13301; Mature: 13301
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 10.4 %Cys+Met (Translated Protein) 7.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 10.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSWTCIENCGACCKFDLNERSDLANKLNKEDKALINSMTAKDGWCKNLDRENRKCLIYE CCCCCCHHHCCCEEEECCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE TRPHFCRVSEFSTSFKGYLKSGDKFLIDCCKQHISSNYGYQSKEMKTFRIAVSGK CCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKSWTCIENCGACCKFDLNERSDLANKLNKEDKALINSMTAKDGWCKNLDRENRKCLIYE CCCCCCHHHCCCEEEECCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEEEE TRPHFCRVSEFSTSFKGYLKSGDKFLIDCCKQHISSNYGYQSKEMKTFRIAVSGK CCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA