| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968513
Identifier: 123968513
GI number: 123968513
Start: 849006
End: 849572
Strand: Direct
Name: 123968513
Synonym: A9601_09801
Alternate gene names: NA
Gene position: 849006-849572 (Clockwise)
Preceding gene: 123968512
Following gene: 123968514
Centisome position: 50.84
GC content: 28.22
Gene sequence:
>567_bases TTGGCAGCTGAAGCATATCTCTGGTTTAAATCACTTCACATTATTGGTGTAATCGTTTGGTTTGCGGGACTTTTTTATTT AGTAAGACTTTTTATATATCATGAAGAATCTAAAAATATGGATAATGAATTAAAAATTGCCTTTAATAAGCAATACACTT TGATGGAAAAAAGGCTGGCGAATATAATCACAACACCTGGGATGATATTAGCTTTAAGTATGGCTATTTGCATGGTTATT ATGCAACCAAGTTGGCTAAGTGAGAAGTGGTTGCAAATTAAAATTTCTTTTGTTTTGGGATTAGTAATTTATCATTCTTA TTGTTATAAAATAATGTATTCATTACATAATGGTACTTCAAGCATTTCAGCAAAGAACCTTAGATTATTAAATGAATTGC CTACTTTATTATTGTTTATAATTGTACTTTTAGTTATTTTTAAAAATAATTTTCCAACTAGTGTTGCTACATGGAGCGTA GTTGGACTTATTATTTTCATGTTGGCTTCAATACAATTATATGCAAAGATTAGAAAGAAAAATGAGAATTCATTAAGTAA TGAATAG
Upstream 100 bases:
>100_bases AACGAGTTATAAATATTAATTAATTTTTGAAAAATAGATTTCTTGATATTGTTAAATATAACTATATTAAAAATATATAT TTTTATATTAATCTAGTAAT
Downstream 100 bases:
>100_bases GGAAGACTTAGTTAAATTAACTTCCAATATTAATAAAAATAGTTGTCCTAAAAATATTAATTTTCACTGTCATACAAAAT TTAGTGATGGAAGTTTAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 187
Protein sequence:
>188_residues MAAEAYLWFKSLHIIGVIVWFAGLFYLVRLFIYHEESKNMDNELKIAFNKQYTLMEKRLANIITTPGMILALSMAICMVI MQPSWLSEKWLQIKISFVLGLVIYHSYCYKIMYSLHNGTSSISAKNLRLLNELPTLLLFIIVLLVIFKNNFPTSVATWSV VGLIIFMLASIQLYAKIRKKNENSLSNE
Sequences:
>Translated_188_residues MAAEAYLWFKSLHIIGVIVWFAGLFYLVRLFIYHEESKNMDNELKIAFNKQYTLMEKRLANIITTPGMILALSMAICMVI MQPSWLSEKWLQIKISFVLGLVIYHSYCYKIMYSLHNGTSSISAKNLRLLNELPTLLLFIIVLLVIFKNNFPTSVATWSV VGLIIFMLASIQLYAKIRKKNENSLSNE >Mature_187_residues AAEAYLWFKSLHIIGVIVWFAGLFYLVRLFIYHEESKNMDNELKIAFNKQYTLMEKRLANIITTPGMILALSMAICMVIM QPSWLSEKWLQIKISFVLGLVIYHSYCYKIMYSLHNGTSSISAKNLRLLNELPTLLLFIIVLLVIFKNNFPTSVATWSVV GLIIFMLASIQLYAKIRKKNENSLSNE
Specific function: Unknown
COG id: COG1981
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0093 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014351 - InterPro: IPR005265 [H]
Pfam domain/function: PF03653 UPF0093 [H]
EC number: NA
Molecular weight: Translated: 21708; Mature: 21577
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAEAYLWFKSLHIIGVIVWFAGLFYLVRLFIYHEESKNMDNELKIAFNKQYTLMEKRLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHH NIITTPGMILALSMAICMVIMQPSWLSEKWLQIKISFVLGLVIYHSYCYKIMYSLHNGTS HHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SISAKNLRLLNELPTLLLFIIVLLVIFKNNFPTSVATWSVVGLIIFMLASIQLYAKIRKK CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC NENSLSNE CCCCCCCC >Mature Secondary Structure AAEAYLWFKSLHIIGVIVWFAGLFYLVRLFIYHEESKNMDNELKIAFNKQYTLMEKRLA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHH NIITTPGMILALSMAICMVIMQPSWLSEKWLQIKISFVLGLVIYHSYCYKIMYSLHNGTS HHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC SISAKNLRLLNELPTLLLFIIVLLVIFKNNFPTSVATWSVVGLIIFMLASIQLYAKIRKK CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC NENSLSNE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]