Click here to switch to the map view.

The map label for this gene is petF2 [H]

Identifier: 123968496

GI number: 123968496

Start: 829560

End: 829934

Strand: Reverse

Name: petF2 [H]

Synonym: A9601_09631

Alternate gene names: 123968496

Gene position: 829934-829560 (Counterclockwise)

Preceding gene: 123968501

Following gene: 123968495

Centisome position: 49.7

GC content: 35.2

Gene sequence:

>375_bases
TTGAAAAAGACTTTCACAGTCACGATTAAAAATAAAGAAACCGGAAAGGTCTACCAAGAGCAGGTTAATAGTGACGAATA
TATACTTAAGGAATTTGAAAAGAAAGGTTTCAAACTTGCATTTTCATGTAGAAATGGTTGCTGTACAAGTTGTGCAGTTA
AAATTAAATCTGGTACTTTACATCAACCTGAAGCAATGGGTGTATCTCAGGCATTAAAAGACAAAGGTTATGCACTTCTT
TGTGTAGCTAAAGCAACTTCAGATCTTGAGGTAGAAACTACATATGAAGATGAAGTTTACGATTTACAATTTGGACAATA
TTTTGGCAGGGGAAATACAAGAGTTGCGCCACCTTGGGAATTTGAGGAGGATTAA

Upstream 100 bases:

>100_bases
CCCTATACAGCATTTCCAGTGCTGCGCCTTCAACCACTCGGCCACCTCTCCCAAGATAACTATTTTAACCCTTGATCATC
CCATTTTAGAGGAAAGTTAT

Downstream 100 bases:

>100_bases
CTATCATGTTTGAATTAAGTGAAATAGAGGAACTTGCAAATCAAGTAAACTTATCTAATTTATATGAAATAGCCAAGAAT
TCCGCTCAAATTGGTAATGA

Product: ferredoxin, petF-like protein

Products: NA

Alternate protein names: Ferredoxin II [H]

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MKKTFTVTIKNKETGKVYQEQVNSDEYILKEFEKKGFKLAFSCRNGCCTSCAVKIKSGTLHQPEAMGVSQALKDKGYALL
CVAKATSDLEVETTYEDEVYDLQFGQYFGRGNTRVAPPWEFEED

Sequences:

>Translated_124_residues
MKKTFTVTIKNKETGKVYQEQVNSDEYILKEFEKKGFKLAFSCRNGCCTSCAVKIKSGTLHQPEAMGVSQALKDKGYALL
CVAKATSDLEVETTYEDEVYDLQFGQYFGRGNTRVAPPWEFEED
>Mature_124_residues
MKKTFTVTIKNKETGKVYQEQVNSDEYILKEFEKKGFKLAFSCRNGCCTSCAVKIKSGTLHQPEAMGVSQALKDKGYALL
CVAKATSDLEVETTYEDEVYDLQFGQYFGRGNTRVAPPWEFEED

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR010241
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 14030; Mature: 14030

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTFTVTIKNKETGKVYQEQVNSDEYILKEFEKKGFKLAFSCRNGCCTSCAVKIKSGTL
CCCEEEEEEECCCCCHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCC
HQPEAMGVSQALKDKGYALLCVAKATSDLEVETTYEDEVYDLQFGQYFGRGNTRVAPPWE
CCCHHCCHHHHHHCCCCEEEEEEECCCCEEEEECCCCCEEEEECHHHHCCCCCCCCCCCC
FEED
CCCC
>Mature Secondary Structure
MKKTFTVTIKNKETGKVYQEQVNSDEYILKEFEKKGFKLAFSCRNGCCTSCAVKIKSGTL
CCCEEEEEEECCCCCHHHHHHCCCCHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCC
HQPEAMGVSQALKDKGYALLCVAKATSDLEVETTYEDEVYDLQFGQYFGRGNTRVAPPWE
CCCHHCCHHHHHHCCCCEEEEEEECCCCEEEEECCCCCEEEEECHHHHCCCCCCCCCCCC
FEED
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3041005; 2843173 [H]