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The map label for this gene is secF [H]

Identifier: 123968465

GI number: 123968465

Start: 802178

End: 803092

Strand: Direct

Name: secF [H]

Synonym: A9601_09321

Alternate gene names: 123968465

Gene position: 802178-803092 (Clockwise)

Preceding gene: 123968464

Following gene: 123968469

Centisome position: 48.04

GC content: 26.67

Gene sequence:

>915_bases
ATGAAATACAATCTTGAACTAATAAAAAATAAAAGAAAAATAATTAGTTTTTCAACTCTTCTTATTTTGTTAAGTCTTTT
AGGAATTTTATATTCAACTTTTAATACTTCTTATAAGAAACCTATAAATTTAGGGATGGATTTTGTTGGAGGAAATGAAC
TAAGAATAGAAAGAGTTTGTGAAGAAGAATGTTCTAATCTTTCCCCTGATTCAGTTTTAGAAAATTTAAGAGAGATCTCT
ATTAATAAAAACTTTATAAATAATATTAAATTACAATTCCAAAATAATAATAAATTAATTTCCATAAGAACGCCTTATTT
GAGTATCGAAGAATCAAATAATCTAATTACTAATCTTGAAAATATTATTGGACCTCTAAATTATGAGAGTAAGGATTCAA
GATTAATAGGTCCAAAGCTTGGGAAAAGATTACTTACCAATTGTGTTACTTCTTTGTTGGTTTCTTTATTTGCAATATCT
TTATATATAACTATTAGGTTTGATAAAAAATATGCATTATTTGCATTAATAGCTTTATTCCATGATTTATTAATTGTTTT
CGGTATATTTTCCTGGTTGGGAATTATATTATCTGTCGAGGTAAATAGTTTATTTGCGGTTTCCTTGTTAACTATTGCTG
GTTATTCTGTAAATGATACTGTTGTTATTTTTGATAGAATTCGTGAGAATTTAAAATCAAAGGAAGAAGGCTATAACGAA
ACTATTCAATTATCAGTAAACGAATCATTTAGGAGAACAACTTTTACCAGTATTACAACCCTTATCCCTTTATTAAGCAT
AATTTTGTTTGGATCTTACTCGCTGTTTTGGTTTTCTTTGGCCTTATCAGTAGGAATTATTGTTGGAAGTTATTCAAGCA
TTTTATTGGCCCCATCTTTGTTGCTTAAAGACTGA

Upstream 100 bases:

>100_bases
CTATTTTGCGATTTTTTACAACATATCAATCTTTAAGAGAAAAAAATCTCTATCTACCCAAGAATAATTTTTCAAATTAA
ATTTTTTGTTTCTAAATTCC

Downstream 100 bases:

>100_bases
ACTTAAGCTTCTCATTTTATGAAATTGAATTACTATTTGATCATTTTATTTTCTTTAGTTTTCATAGATCTTTCTACTGA
GCTAAGAATATTATTTGATC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKYNLELIKNKRKIISFSTLLILLSLLGILYSTFNTSYKKPINLGMDFVGGNELRIERVCEEECSNLSPDSVLENLREIS
INKNFINNIKLQFQNNNKLISIRTPYLSIEESNNLITNLENIIGPLNYESKDSRLIGPKLGKRLLTNCVTSLLVSLFAIS
LYITIRFDKKYALFALIALFHDLLIVFGIFSWLGIILSVEVNSLFAVSLLTIAGYSVNDTVVIFDRIRENLKSKEEGYNE
TIQLSVNESFRRTTFTSITTLIPLLSIILFGSYSLFWFSLALSVGIIVGSYSSILLAPSLLLKD

Sequences:

>Translated_304_residues
MKYNLELIKNKRKIISFSTLLILLSLLGILYSTFNTSYKKPINLGMDFVGGNELRIERVCEEECSNLSPDSVLENLREIS
INKNFINNIKLQFQNNNKLISIRTPYLSIEESNNLITNLENIIGPLNYESKDSRLIGPKLGKRLLTNCVTSLLVSLFAIS
LYITIRFDKKYALFALIALFHDLLIVFGIFSWLGIILSVEVNSLFAVSLLTIAGYSVNDTVVIFDRIRENLKSKEEGYNE
TIQLSVNESFRRTTFTSITTLIPLLSIILFGSYSLFWFSLALSVGIIVGSYSSILLAPSLLLKD
>Mature_304_residues
MKYNLELIKNKRKIISFSTLLILLSLLGILYSTFNTSYKKPINLGMDFVGGNELRIERVCEEECSNLSPDSVLENLREIS
INKNFINNIKLQFQNNNKLISIRTPYLSIEESNNLITNLENIIGPLNYESKDSRLIGPKLGKRLLTNCVTSLLVSLFAIS
LYITIRFDKKYALFALIALFHDLLIVFGIFSWLGIILSVEVNSLFAVSLLTIAGYSVNDTVVIFDRIRENLKSKEEGYNE
TIQLSVNESFRRTTFTSITTLIPLLSIILFGSYSLFWFSLALSVGIIVGSYSSILLAPSLLLKD

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=321, Percent_Identity=28.6604361370716, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1786609, Length=221, Percent_Identity=29.8642533936652, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 34350; Mature: 34350

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYNLELIKNKRKIISFSTLLILLSLLGILYSTFNTSYKKPINLGMDFVGGNELRIERVC
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHH
EEECSNLSPDSVLENLREISINKNFINNIKLQFQNNNKLISIRTPYLSIEESNNLITNLE
HHHHCCCCHHHHHHHHHHHHCCCHHHCCEEEEEECCCEEEEEECCEEEEECCCCHHHHHH
NIIGPLNYESKDSRLIGPKLGKRLLTNCVTSLLVSLFAISLYITIRFDKKYALFALIALF
HHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHH
HDLLIVFGIFSWLGIILSVEVNSLFAVSLLTIAGYSVNDTVVIFDRIRENLKSKEEGYNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCC
TIQLSVNESFRRTTFTSITTLIPLLSIILFGSYSLFWFSLALSVGIIVGSYSSILLAPSL
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LLKD
HHCC
>Mature Secondary Structure
MKYNLELIKNKRKIISFSTLLILLSLLGILYSTFNTSYKKPINLGMDFVGGNELRIERVC
CCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCHHHHHHHH
EEECSNLSPDSVLENLREISINKNFINNIKLQFQNNNKLISIRTPYLSIEESNNLITNLE
HHHHCCCCHHHHHHHHHHHHCCCHHHCCEEEEEECCCEEEEEECCEEEEECCCCHHHHHH
NIIGPLNYESKDSRLIGPKLGKRLLTNCVTSLLVSLFAISLYITIRFDKKYALFALIALF
HHHCCCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHH
HDLLIVFGIFSWLGIILSVEVNSLFAVSLLTIAGYSVNDTVVIFDRIRENLKSKEEGYNE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHCCCCC
TIQLSVNESFRRTTFTSITTLIPLLSIILFGSYSLFWFSLALSVGIIVGSYSSILLAPSL
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
LLKD
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]