| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is menB [H]
Identifier: 123968199
GI number: 123968199
Start: 587610
End: 588467
Strand: Direct
Name: menB [H]
Synonym: A9601_06641
Alternate gene names: 123968199
Gene position: 587610-588467 (Clockwise)
Preceding gene: 123968198
Following gene: 123968200
Centisome position: 35.19
GC content: 36.83
Gene sequence:
>858_bases ATGAAAGTATTACCTGGTAAAACAAATTTAAATTGGTCAGAATGCAAATCTTATGAGGATATATTGTTTCATAAATCTGA TGAGGGAATTGCGAGAATTGCAATCAATCGGCCTGAAAAAAGAAATGCATTTAGGCCACAAACTGTAGATGAACTTATCA ATGCATTTAATATCGTAAGAAATGATGAAACTATTGGCGTAGTTCTCTTTACAGGTGCGGGACCTGACAAGAAAGGTATT TATTCTTTTTGCTCTGGAGGTGATCAGAGCGTAAGAGGTGAAAATGGATACAAAAATTATGAAGGGAAGCAGAGATTAAA TGTACTTGAACTTCAAAGATTAATAAGAAGTTTGCCTAAAGTGGTTATTGCCTTAGTCCCTGGTTTCGCAATTGGAGGAG GCCAGGTGCTTCATTTGATTTGTGATCTAAGTATCGCCTCTGAAAATGCAATATTTGGTCAAACAGGTCCCAGAGTTGGT AGTTTTGATGCTGGATTTGGATCTAGTTATTTGGCAAGACTTGTTGGTCAAAGAAAAGCAAAAGAAATTTGGTTTTTATG TAGAAAATATAATTCTGAGGAAGCACTCGAGATGGGCTTGATAAATGCAATTACAAAGATTGAAGAATTAGAAGCTGAGG GTGTAATCTGGGCAAGAGAGATATTACGAAATAGTCCAACTGCTATTCGTATTCTTAAAGCTTCATTCAATGCTGAGAAT GATGGGATTGCAGGTATTCAAGAATTATCTGGATACACAACTCAATTATTTTATTCCACTGAAGAAGCCCAAGAAGGTAG AGATGCCTTTCTTGAAAAGCGTCCTCCAGACTTCTCTGACTACAAGTGGACACCCTAA
Upstream 100 bases:
>100_bases ATATTGATCCACAAAATGAAATTTGTGAAAAAAATTCTCTGCTAGAAAAAATAATTGGCAGTTAAATTTATGATTTTTTA TCTTTGAATAATTAGAATTC
Downstream 100 bases:
>100_bases TTTATTTTTCAAAAGAACTTTATTAAATAATTATCAATGAGAATTCTTCTTGCCGCTGCCGAATGTGCTCCAATGATCAA AGTTGGAGGTATGGGAGATG
Product: naphthoate synthase
Products: NA
Alternate protein names: DHNA-CoA synthase [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MKVLPGKTNLNWSECKSYEDILFHKSDEGIARIAINRPEKRNAFRPQTVDELINAFNIVRNDETIGVVLFTGAGPDKKGI YSFCSGGDQSVRGENGYKNYEGKQRLNVLELQRLIRSLPKVVIALVPGFAIGGGQVLHLICDLSIASENAIFGQTGPRVG SFDAGFGSSYLARLVGQRKAKEIWFLCRKYNSEEALEMGLINAITKIEELEAEGVIWAREILRNSPTAIRILKASFNAEN DGIAGIQELSGYTTQLFYSTEEAQEGRDAFLEKRPPDFSDYKWTP
Sequences:
>Translated_285_residues MKVLPGKTNLNWSECKSYEDILFHKSDEGIARIAINRPEKRNAFRPQTVDELINAFNIVRNDETIGVVLFTGAGPDKKGI YSFCSGGDQSVRGENGYKNYEGKQRLNVLELQRLIRSLPKVVIALVPGFAIGGGQVLHLICDLSIASENAIFGQTGPRVG SFDAGFGSSYLARLVGQRKAKEIWFLCRKYNSEEALEMGLINAITKIEELEAEGVIWAREILRNSPTAIRILKASFNAEN DGIAGIQELSGYTTQLFYSTEEAQEGRDAFLEKRPPDFSDYKWTP >Mature_285_residues MKVLPGKTNLNWSECKSYEDILFHKSDEGIARIAINRPEKRNAFRPQTVDELINAFNIVRNDETIGVVLFTGAGPDKKGI YSFCSGGDQSVRGENGYKNYEGKQRLNVLELQRLIRSLPKVVIALVPGFAIGGGQVLHLICDLSIASENAIFGQTGPRVG SFDAGFGSSYLARLVGQRKAKEIWFLCRKYNSEEALEMGLINAITKIEELEAEGVIWAREILRNSPTAIRILKASFNAEN DGIAGIQELSGYTTQLFYSTEEAQEGRDAFLEKRPPDFSDYKWTP
Specific function: Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) [H]
COG id: COG0447
COG function: function code H; Dihydroxynaphthoic acid synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=273, Percent_Identity=29.6703296703297, Blast_Score=108, Evalue=7e-24, Organism=Homo sapiens, GI31542718, Length=262, Percent_Identity=28.2442748091603, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI4502327, Length=276, Percent_Identity=28.9855072463768, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI45643119, Length=219, Percent_Identity=27.3972602739726, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI260275230, Length=219, Percent_Identity=27.3972602739726, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI260274832, Length=219, Percent_Identity=28.310502283105, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI4757966, Length=228, Percent_Identity=27.1929824561404, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI51538581, Length=228, Percent_Identity=27.1929824561404, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI25453481, Length=228, Percent_Identity=27.1929824561404, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI51538573, Length=228, Percent_Identity=27.1929824561404, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI70995211, Length=235, Percent_Identity=27.2340425531915, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1788597, Length=278, Percent_Identity=58.6330935251799, Blast_Score=346, Evalue=1e-96, Organism=Escherichia coli, GI1787659, Length=251, Percent_Identity=28.2868525896414, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI87082183, Length=260, Percent_Identity=27.6923076923077, Blast_Score=89, Evalue=4e-19, Organism=Escherichia coli, GI1787660, Length=268, Percent_Identity=29.1044776119403, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI221142681, Length=266, Percent_Identity=28.5714285714286, Blast_Score=72, Evalue=4e-14, Organism=Caenorhabditis elegans, GI25145438, Length=263, Percent_Identity=31.5589353612167, Blast_Score=109, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17554946, Length=255, Percent_Identity=28.6274509803922, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI17540714, Length=214, Percent_Identity=29.4392523364486, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17549921, Length=209, Percent_Identity=27.7511961722488, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17560910, Length=185, Percent_Identity=29.7297297297297, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17534483, Length=266, Percent_Identity=25.5639097744361, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24653139, Length=284, Percent_Identity=29.9295774647887, Blast_Score=101, Evalue=5e-22, Organism=Drosophila melanogaster, GI20129971, Length=276, Percent_Identity=28.6231884057971, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24653477, Length=276, Percent_Identity=28.6231884057971, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI21357171, Length=199, Percent_Identity=30.6532663316583, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24654903, Length=186, Percent_Identity=31.7204301075269, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI24650670, Length=181, Percent_Identity=29.8342541436464, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 - InterPro: IPR010198 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.1.3.36 [H]
Molecular weight: Translated: 31732; Mature: 31732
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVLPGKTNLNWSECKSYEDILFHKSDEGIARIAINRPEKRNAFRPQTVDELINAFNIVR CCCCCCCCCCCHHHHCCHHHHHEECCCCCEEEEEECCCHHCCCCCCHHHHHHHHHHHHHC NDETIGVVLFTGAGPDKKGIYSFCSGGDQSVRGENGYKNYEGKQRLNVLELQRLIRSLPK CCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VVIALVPGFAIGGGQVLHLICDLSIASENAIFGQTGPRVGSFDAGFGSSYLARLVGQRKA HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHH KEIWFLCRKYNSEEALEMGLINAITKIEELEAEGVIWAREILRNSPTAIRILKASFNAEN HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCC DGIAGIQELSGYTTQLFYSTEEAQEGRDAFLEKRPPDFSDYKWTP CCCCHHHHHCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKVLPGKTNLNWSECKSYEDILFHKSDEGIARIAINRPEKRNAFRPQTVDELINAFNIVR CCCCCCCCCCCHHHHCCHHHHHEECCCCCEEEEEECCCHHCCCCCCHHHHHHHHHHHHHC NDETIGVVLFTGAGPDKKGIYSFCSGGDQSVRGENGYKNYEGKQRLNVLELQRLIRSLPK CCCEEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VVIALVPGFAIGGGQVLHLICDLSIASENAIFGQTGPRVGSFDAGFGSSYLARLVGQRKA HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHH KEIWFLCRKYNSEEALEMGLINAITKIEELEAEGVIWAREILRNSPTAIRILKASFNAEN HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEEEEEECCCCCC DGIAGIQELSGYTTQLFYSTEEAQEGRDAFLEKRPPDFSDYKWTP CCCCHHHHHCCCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]