| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968079
Identifier: 123968079
GI number: 123968079
Start: 470612
End: 471211
Strand: Direct
Name: 123968079
Synonym: A9601_05421
Alternate gene names: NA
Gene position: 470612-471211 (Clockwise)
Preceding gene: 123968078
Following gene: 123968080
Centisome position: 28.18
GC content: 27.17
Gene sequence:
>600_bases ATGTTAAAAAACCCTATCCCAAAAGTTACTAACCAATTACAGCACAGAGCAATCGGTATTATTAATGGTAAATTCACTCC CCTTAGTAATGATCAATTAAATAGAGGATTTTTAATTGACAATAAAGAAGAAAAAATTGAAACAGTAGTTCTTGGTAAAG CATTATCACTTTTAAAAAAGCATATTGATTTAAAGAAAAGTTATTATTGGATTGTTTATCCAAAGAATAAAAATACTCAA AACTTGCATTTACAGGTCGCAGGGATATGGGATCCCTATCAACTGAATGATTTCCCTAATGATTCTTCAAAAACTAACTT CTCCAAATTATTAGAAGAATTAGATCTAAAAGACAATTATTTTTCTGTTAGAGGAGAATTAGTTTTTGTTAACACTCAAA AGAAAGAAATTGTTATTAAAATCTGCCCTGCTGTAAAATCAAAAAATTTAAAAAATAAAAATTTTAAATTAGTTATAAAA GGAGAGCTTTCTCTTGAGCTTGTGCATAGTTTTGTCAGTTTAGATATCAACAGAGATGGAAATTCTTTGCAATTAATTAA GTACGAAGTGATTGAAAAAAATCTTTCTAAAAATAACTAG
Upstream 100 bases:
>100_bases GATCCTTCTGATGCAATTGACGATGCGTTAAGGTCTTTTAATAGTTTGAAGGAAAATCAAGAAATTTAATACGATAAATT GTTATTTTCAAATTTTTAAT
Downstream 100 bases:
>100_bases AATGAAAGGTTGATTTTCACCGCAATTTTACCAGTTAAAAATCTTTGATTTATGGATGATATTTTAATTGAATGTTCTCC AGGTATCTCTGGAGATATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MLKNPIPKVTNQLQHRAIGIINGKFTPLSNDQLNRGFLIDNKEEKIETVVLGKALSLLKKHIDLKKSYYWIVYPKNKNTQ NLHLQVAGIWDPYQLNDFPNDSSKTNFSKLLEELDLKDNYFSVRGELVFVNTQKKEIVIKICPAVKSKNLKNKNFKLVIK GELSLELVHSFVSLDINRDGNSLQLIKYEVIEKNLSKNN
Sequences:
>Translated_199_residues MLKNPIPKVTNQLQHRAIGIINGKFTPLSNDQLNRGFLIDNKEEKIETVVLGKALSLLKKHIDLKKSYYWIVYPKNKNTQ NLHLQVAGIWDPYQLNDFPNDSSKTNFSKLLEELDLKDNYFSVRGELVFVNTQKKEIVIKICPAVKSKNLKNKNFKLVIK GELSLELVHSFVSLDINRDGNSLQLIKYEVIEKNLSKNN >Mature_199_residues MLKNPIPKVTNQLQHRAIGIINGKFTPLSNDQLNRGFLIDNKEEKIETVVLGKALSLLKKHIDLKKSYYWIVYPKNKNTQ NLHLQVAGIWDPYQLNDFPNDSSKTNFSKLLEELDLKDNYFSVRGELVFVNTQKKEIVIKICPAVKSKNLKNKNFKLVIK GELSLELVHSFVSLDINRDGNSLQLIKYEVIEKNLSKNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22935; Mature: 22935
Theoretical pI: Translated: 10.14; Mature: 10.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKNPIPKVTNQLQHRAIGIINGKFTPLSNDQLNRGFLIDNKEEKIETVVLGKALSLLKK CCCCCCHHHHHHHHHHEEEEECCEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHH HIDLKKSYYWIVYPKNKNTQNLHLQVAGIWDPYQLNDFPNDSSKTNFSKLLEELDLKDNY HHCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCE FSVRGELVFVNTQKKEIVIKICPAVKSKNLKNKNFKLVIKGELSLELVHSFVSLDINRDG EEEEEEEEEEECCCCEEEEEECCCHHCCCCCCCCEEEEEECCCCHHHHHHHHEEEECCCC NSLQLIKYEVIEKNLSKNN CEEEEEEHHHHHHHCCCCC >Mature Secondary Structure MLKNPIPKVTNQLQHRAIGIINGKFTPLSNDQLNRGFLIDNKEEKIETVVLGKALSLLKK CCCCCCHHHHHHHHHHEEEEECCEECCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHH HIDLKKSYYWIVYPKNKNTQNLHLQVAGIWDPYQLNDFPNDSSKTNFSKLLEELDLKDNY HHCCCCCEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCE FSVRGELVFVNTQKKEIVIKICPAVKSKNLKNKNFKLVIKGELSLELVHSFVSLDINRDG EEEEEEEEEEECCCCEEEEEECCCHHCCCCCCCCEEEEEECCCCHHHHHHHHEEEECCCC NSLQLIKYEVIEKNLSKNN CEEEEEEHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA