| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968078
Identifier: 123968078
GI number: 123968078
Start: 470287
End: 470580
Strand: Direct
Name: 123968078
Synonym: A9601_05411
Alternate gene names: NA
Gene position: 470287-470580 (Clockwise)
Preceding gene: 123968075
Following gene: 123968079
Centisome position: 28.16
GC content: 29.59
Gene sequence:
>294_bases ATGAAAAATTATTTTTGCAAAAGCGTTTCTAAACCAATTTCGGTTGTAATTTTTTTTACTTTATTAATATCCTTAAAAAG TGATTGTCTAAATGCTGAATATTTATTTGAAGAATTAGAAATCGATACCTCAACTAAAACAGAAGATGATAGTTCAGCTC TTCCAACTAATCCTTTTGAACTTGTGGAAATGATTCGGAGACAGAATAGTATGAATGATGCGACTGATCCTTCTGATGCA ATTGACGATGCGTTAAGGTCTTTTAATAGTTTGAAGGAAAATCAAGAAATTTAA
Upstream 100 bases:
>100_bases AGTTAACATTCCAAGTTGCTATTAACAAATTTCTCCCAAATTATGTAAAATTAAAATAGCAAAAAATTTTTGGCTTTAAA GAATTTTGAAATCAAATAAA
Downstream 100 bases:
>100_bases TACGATAAATTGTTATTTTCAAATTTTTAATATGTTAAAAAACCCTATCCCAAAAGTTACTAACCAATTACAGCACAGAG CAATCGGTATTATTAATGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 97
Protein sequence:
>97_residues MKNYFCKSVSKPISVVIFFTLLISLKSDCLNAEYLFEELEIDTSTKTEDDSSALPTNPFELVEMIRRQNSMNDATDPSDA IDDALRSFNSLKENQEI
Sequences:
>Translated_97_residues MKNYFCKSVSKPISVVIFFTLLISLKSDCLNAEYLFEELEIDTSTKTEDDSSALPTNPFELVEMIRRQNSMNDATDPSDA IDDALRSFNSLKENQEI >Mature_97_residues MKNYFCKSVSKPISVVIFFTLLISLKSDCLNAEYLFEELEIDTSTKTEDDSSALPTNPFELVEMIRRQNSMNDATDPSDA IDDALRSFNSLKENQEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11033; Mature: 11033
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNYFCKSVSKPISVVIFFTLLISLKSDCLNAEYLFEELEIDTSTKTEDDSSALPTNPFE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH LVEMIRRQNSMNDATDPSDAIDDALRSFNSLKENQEI HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKNYFCKSVSKPISVVIFFTLLISLKSDCLNAEYLFEELEIDTSTKTEDDSSALPTNPFE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH LVEMIRRQNSMNDATDPSDAIDDALRSFNSLKENQEI HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA