Click here to switch to the map view.

The map label for this gene is ctaA

Identifier: 123968039

GI number: 123968039

Start: 437338

End: 438264

Strand: Direct

Name: ctaA

Synonym: A9601_05021

Alternate gene names: NA

Gene position: 437338-438264 (Clockwise)

Preceding gene: 123968034

Following gene: 123968040

Centisome position: 26.19

GC content: 29.99

Gene sequence:

>927_bases
TTGATTAATAACCAATTATATAAATCAAAATATCTGACAATTTTTAAAAGGTTGGGAAGTCATAGTGTATTTGCACTTAT
CGCACTAATCGTAATTGGAGGCGCTACGAGAGTTATGGAGGCAGGACTTGCCTGTCCAGATTGGCCATTATGTTATGGAT
CTTTTTTGCCTTTTAAACATATGAACCTAAGAGTATTTCTAGAGTGGTTTCATCGTCTAGATGCTTTTCTGGTTGGAATA
TTAATTTTTTTTAAATTTGCTCTTTCAATTATTTGGAAAAATGAAATTCCAAATTGGTTACCTAAAACTTATTCATTATT
ACTTTTTCTCGTTATTGTCCAAGGATCCTTTGGTGCTTTAACAGTAATAAACCTGCTTGATTCATATACTGTTACTGGCC
ATCTTTTAATAGCTTTTCTACTTCTCATTACAACAATTTCAATAAATCAAAATTTAGAAAATGACGACATTGAAGAGCCA
TTAATTTGGTGGAGATTATTATTTTTTGTTCCTCTTTTACTTACTCTGATTCAATCTTTTATAGGCGTAAGGCTTTCATC
AACCTGGTCAGCACATATTTGCTTATCTTTTAATAAACAATGTTTAATTCTAGATACTCATAAATTATTTGCTTTTCCAA
TTGCTTTCTCAATTTTATTGATTATTGCTATTGCAATTTATAAGAGAAGTTTGCTTAATAAAAATTGGAAATATCTCACA
ACACTTATTTTTCTCTTATTTTCCCAAATTACTTTGGGTGTTTTAAGTCTTAAAACAAATTTGAATGAACCTATTTTTAT
TATCGGTCACCAACTTAATGCCTCATTATTTATTGCGATATTAACAACATTAATTTTTAGAAATCCTTTTACCAAAAAAG
GTCTAAACCACTCCCTTAATCCCCAAACGGTCGGTATCAACTCATGA

Upstream 100 bases:

>100_bases
TTAAATTAGTAAATTATTTTTTAAATTAAACATATTAATTTTTAATTAATGTTTGGTTTTTGAATCTAATTTATTATGCA
AAATAATAGGTTTTATCCAT

Downstream 100 bases:

>100_bases
ACAGTAGTAACTTAGAAAACTTGAACTATAAATCTTCAATTAGGGATGAAGTTGTACCTTCAAGAAAAAAATTAACTTTG
CCGCCTTGGCTTGAAGTAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Cytochrome Oxidase Assembly Protein; Cytochrome C Oxidase Assembly Protein; Cytochrome C Oxidase Subunit XV Assembly Protein; Cytochrome Oxidase Assembly Protein Subfamily Protein

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MINNQLYKSKYLTIFKRLGSHSVFALIALIVIGGATRVMEAGLACPDWPLCYGSFLPFKHMNLRVFLEWFHRLDAFLVGI
LIFFKFALSIIWKNEIPNWLPKTYSLLLFLVIVQGSFGALTVINLLDSYTVTGHLLIAFLLLITTISINQNLENDDIEEP
LIWWRLLFFVPLLLTLIQSFIGVRLSSTWSAHICLSFNKQCLILDTHKLFAFPIAFSILLIIAIAIYKRSLLNKNWKYLT
TLIFLLFSQITLGVLSLKTNLNEPIFIIGHQLNASLFIAILTTLIFRNPFTKKGLNHSLNPQTVGINS

Sequences:

>Translated_308_residues
MINNQLYKSKYLTIFKRLGSHSVFALIALIVIGGATRVMEAGLACPDWPLCYGSFLPFKHMNLRVFLEWFHRLDAFLVGI
LIFFKFALSIIWKNEIPNWLPKTYSLLLFLVIVQGSFGALTVINLLDSYTVTGHLLIAFLLLITTISINQNLENDDIEEP
LIWWRLLFFVPLLLTLIQSFIGVRLSSTWSAHICLSFNKQCLILDTHKLFAFPIAFSILLIIAIAIYKRSLLNKNWKYLT
TLIFLLFSQITLGVLSLKTNLNEPIFIIGHQLNASLFIAILTTLIFRNPFTKKGLNHSLNPQTVGINS
>Mature_308_residues
MINNQLYKSKYLTIFKRLGSHSVFALIALIVIGGATRVMEAGLACPDWPLCYGSFLPFKHMNLRVFLEWFHRLDAFLVGI
LIFFKFALSIIWKNEIPNWLPKTYSLLLFLVIVQGSFGALTVINLLDSYTVTGHLLIAFLLLITTISINQNLENDDIEEP
LIWWRLLFFVPLLLTLIQSFIGVRLSSTWSAHICLSFNKQCLILDTHKLFAFPIAFSILLIIAIAIYKRSLLNKNWKYLT
TLIFLLFSQITLGVLSLKTNLNEPIFIIGHQLNASLFIAILTTLIFRNPFTKKGLNHSLNPQTVGINS

Specific function: Unknown

COG id: COG1612

COG function: function code O; Uncharacterized protein required for cytochrome oxidase assembly

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35133; Mature: 35133

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINNQLYKSKYLTIFKRLGSHSVFALIALIVIGGATRVMEAGLACPDWPLCYGSFLPFKH
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHCCCCCCHH
MNLRVFLEWFHRLDAFLVGILIFFKFALSIIWKNEIPNWLPKTYSLLLFLVIVQGSFGAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHH
TVINLLDSYTVTGHLLIAFLLLITTISINQNLENDDIEEPLIWWRLLFFVPLLLTLIQSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IGVRLSSTWSAHICLSFNKQCLILDTHKLFAFPIAFSILLIIAIAIYKRSLLNKNWKYLT
HCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
TLIFLLFSQITLGVLSLKTNLNEPIFIIGHQLNASLFIAILTTLIFRNPFTKKGLNHSLN
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PQTVGINS
CCCCCCCC
>Mature Secondary Structure
MINNQLYKSKYLTIFKRLGSHSVFALIALIVIGGATRVMEAGLACPDWPLCYGSFLPFKH
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHCCCCCCHH
MNLRVFLEWFHRLDAFLVGILIFFKFALSIIWKNEIPNWLPKTYSLLLFLVIVQGSFGAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHH
TVINLLDSYTVTGHLLIAFLLLITTISINQNLENDDIEEPLIWWRLLFFVPLLLTLIQSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
IGVRLSSTWSAHICLSFNKQCLILDTHKLFAFPIAFSILLIIAIAIYKRSLLNKNWKYLT
HCCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
TLIFLLFSQITLGVLSLKTNLNEPIFIIGHQLNASLFIAILTTLIFRNPFTKKGLNHSLN
HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PQTVGINS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA