| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is bcp [H]
Identifier: 123967918
GI number: 123967918
Start: 341466
End: 341915
Strand: Direct
Name: bcp [H]
Synonym: A9601_03811
Alternate gene names: 123967918
Gene position: 341466-341915 (Clockwise)
Preceding gene: 123967916
Following gene: 123967919
Centisome position: 20.45
GC content: 32.89
Gene sequence:
>450_bases GTGCAGATTGGAGATAAAATTCCAGAATTTTCTTTACTGGATCAAAATGGAGTTAAAAGATCAAATAAGGGATTAAAAAA TCCCCTTGTTTTGTTTTTTTATCCAAAAGATGATACGCCAGGTTGCACTATAGAAGTTTGCGGATTTAGAGATAAATATG ACTTATTTAAAGTACTAGGTGCAGAAGTTTGGGGAGTAAGTAATGGAAGTACCTCAAGTCATTTAGCATTCGCCAATAAA AATAAATTACAATATCCATTACTTTGTGATACGAATGACGCTCTTAGGCAAACTTTTAAAGTTCCTAAAGTATTAGGCTT TATGGATGGTAGGGTAACTTACGTTATCGATCGCAAAGGAACAGTTAGACATATTTTTAGAGATTTATTGAATGGTCCTG AACACATTAAAGAGGCTATTAGGGTGCTTAAGGAAATTCAAAATCAATAA
Upstream 100 bases:
>100_bases TCAAATTAAACATAAAAACTGACTTAAATATTAGTTATTTCCTTTGAAGGCCACAATAAAAACATATTAACCTCTAATAT GGAATTTTATAAGAACTGTT
Downstream 100 bases:
>100_bases ATTATTATTCAAGGAATTTTAGATTAATAAGTTTTGTTTTATCATAGTTTCAGCTTTTTTAATAATATGAAGAAAATGGG AATGCAGGCTGTTGATCTTG
Product: putative bacterioferritin comigratory protein
Products: NA
Alternate protein names: Bacterioferritin comigratory protein; Thioredoxin reductase [H]
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MQIGDKIPEFSLLDQNGVKRSNKGLKNPLVLFFYPKDDTPGCTIEVCGFRDKYDLFKVLGAEVWGVSNGSTSSHLAFANK NKLQYPLLCDTNDALRQTFKVPKVLGFMDGRVTYVIDRKGTVRHIFRDLLNGPEHIKEAIRVLKEIQNQ
Sequences:
>Translated_149_residues MQIGDKIPEFSLLDQNGVKRSNKGLKNPLVLFFYPKDDTPGCTIEVCGFRDKYDLFKVLGAEVWGVSNGSTSSHLAFANK NKLQYPLLCDTNDALRQTFKVPKVLGFMDGRVTYVIDRKGTVRHIFRDLLNGPEHIKEAIRVLKEIQNQ >Mature_149_residues MQIGDKIPEFSLLDQNGVKRSNKGLKNPLVLFFYPKDDTPGCTIEVCGFRDKYDLFKVLGAEVWGVSNGSTSSHLAFANK NKLQYPLLCDTNDALRQTFKVPKVLGFMDGRVTYVIDRKGTVRHIFRDLLNGPEHIKEAIRVLKEIQNQ
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Homo sapiens, GI32189392, Length=126, Percent_Identity=34.9206349206349, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1788825, Length=142, Percent_Identity=35.9154929577465, Blast_Score=87, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17554494, Length=126, Percent_Identity=36.5079365079365, Blast_Score=71, Evalue=2e-13, Organism=Saccharomyces cerevisiae, GI6322180, Length=93, Percent_Identity=44.0860215053763, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 16901; Mature: 16901
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIGDKIPEFSLLDQNGVKRSNKGLKNPLVLFFYPKDDTPGCTIEVCGFRDKYDLFKVLG CCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHH AEVWGVSNGSTSSHLAFANKNKLQYPLLCDTNDALRQTFKVPKVLGFMDGRVTYVIDRKG HHHCCCCCCCCCCEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCC TVRHIFRDLLNGPEHIKEAIRVLKEIQNQ CHHHHHHHHCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MQIGDKIPEFSLLDQNGVKRSNKGLKNPLVLFFYPKDDTPGCTIEVCGFRDKYDLFKVLG CCCCCCCCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCHHHHHHHHH AEVWGVSNGSTSSHLAFANKNKLQYPLLCDTNDALRQTFKVPKVLGFMDGRVTYVIDRKG HHHCCCCCCCCCCEEEEECCCCCCCCEEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCC TVRHIFRDLLNGPEHIKEAIRVLKEIQNQ CHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]