Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123967919

Identifier: 123967919

GI number: 123967919

Start: 341982

End: 342254

Strand: Direct

Name: 123967919

Synonym: A9601_03821

Alternate gene names: NA

Gene position: 341982-342254 (Clockwise)

Preceding gene: 123967918

Following gene: 123967922

Centisome position: 20.48

GC content: 31.87

Gene sequence:

>273_bases
ATGAAGAAAATGGGAATGCAGGCTGTTGATCTTGCTATTCAAAATGGAGTGGATCTTGACGGTACTCCAATACCTCAAAA
AATGCTAGATCTTTATAACAGAATTATGGATGAGGAGAATAAAAGACAAAGGAGCGGTGTTAAAAAATCAATGAGAAATA
GATGCGTCAAAACTGGTTCTAAGCATTTTGATAAAGAAACATTGAATCAATTATTAATAGAATCAGGATGGGAAGGTCTC
AAAGAAAAGGAAATTTTATTTTTTTATAACTAA

Upstream 100 bases:

>100_bases
TATTAGGGTGCTTAAGGAAATTCAAAATCAATAAATTATTATTCAAGGAATTTTAGATTAATAAGTTTTGTTTTATCATA
GTTTCAGCTTTTTTAATAAT

Downstream 100 bases:

>100_bases
AAAAATTTTTTATAAAATAAAATACATATCGCAATTTTTACTTAAATTAAAAAACTGAGAACTAATTAAATATTTTCTTA
GATCTAATTTTTTGAATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MKKMGMQAVDLAIQNGVDLDGTPIPQKMLDLYNRIMDEENKRQRSGVKKSMRNRCVKTGSKHFDKETLNQLLIESGWEGL
KEKEILFFYN

Sequences:

>Translated_90_residues
MKKMGMQAVDLAIQNGVDLDGTPIPQKMLDLYNRIMDEENKRQRSGVKKSMRNRCVKTGSKHFDKETLNQLLIESGWEGL
KEKEILFFYN
>Mature_90_residues
MKKMGMQAVDLAIQNGVDLDGTPIPQKMLDLYNRIMDEENKRQRSGVKKSMRNRCVKTGSKHFDKETLNQLLIESGWEGL
KEKEILFFYN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10478; Mature: 10478

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMGMQAVDLAIQNGVDLDGTPIPQKMLDLYNRIMDEENKRQRSGVKKSMRNRCVKTGS
CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
KHFDKETLNQLLIESGWEGLKEKEILFFYN
CCCCHHHHHHHHHHHCCCCCCCCCEEEEEC
>Mature Secondary Structure
MKKMGMQAVDLAIQNGVDLDGTPIPQKMLDLYNRIMDEENKRQRSGVKKSMRNRCVKTGS
CCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCC
KHFDKETLNQLLIESGWEGLKEKEILFFYN
CCCCHHHHHHHHHHHCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA